RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ELOVL5Q9NYP7 299 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 SIRT4Q9Y6E7 314 aaPredicted RBP5.65□□□□□ -1.5
CDKL5-205ENST00000623535 B4E171 279 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 HPXP02790 462 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 ACSM4P0C7M7 580 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 HLA-GP17693 338 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 ENDOGQ14249 297 aaKnown RBP5.65□□□□□ -1.5
CDKL5-205ENST00000623535 OR4A47Q6IF82 309 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 COQ10BQ9H8M1 238 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 TIMM23O14925 209 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 PDCD1Q15116 288 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 LRRC56Q8IYG6 542 aaPredicted RBP5.65□□□□□ -1.5
CDKL5-205ENST00000623535 SLC38A9Q8NBW4 561 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 STXBP6Q8NFX7 210 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 KPTNQ9Y664 436 aa5.65□□□□□ -1.5
CDKL5-205ENST00000623535 ZNF705GA8MUZ8 300 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 M0R3E3 92 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 TGFAP01135 160 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 MGPP08493 103 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 MMP7P09237 267 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 H2AFB1P0C5Y9 115 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 RBMS2Q15434 407 aaKnown RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 PRR27Q6MZM9 219 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 FAM53AQ6NSI3 398 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 GPR26Q8NDV2 337 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 OR2Y1Q8NGV0 311 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 POFUT1Q9H488 388 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 GTF3C1Q12789 2109 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 IGKV6D-41A0A0C4DH26 115 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 LAMP1P11279 417 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 CD1EP15812 388 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 SPCS3P61009 180 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 H3F3AP84243 136 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 SLC9A3R2Q15599 337 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 Q499Y3 187 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 TBC1D26Q86UD7 250 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 OR4A5Q8NH83 315 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 ERGIC1Q969X5 290 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 IL17CQ9P0M4 197 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 A0A1W2PRD5 423 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 A0A1W2PRF3 423 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 A0A1W2PRM7 423 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 BMPR1BO00238 502 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 SHBGP04278 402 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 ALDOCP09972 364 aaKnown RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 CTSSP25774 331 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 PHLDA2Q53GA4 152 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 AKIP1Q9NQ31 210 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 LSM2Q9Y333 95 aaKnown RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 FER1L6Q2WGJ9 1857 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 SHROOM3Q8TF72 1996 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 LEUTXA8MZ59 168 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 J3QKU1 62 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF354AO60765 605 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 LGALSLQ3ZCW2 172 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 SPANXN5Q5MJ07 72 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 FNDC7Q5VTL7 733 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 FOXN4Q96NZ1 517 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 LRRC61Q9BV99 259 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 PIPOXQ9P0Z9 390 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 CD300AQ9UGN4 299 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 KRBOX1C9JBD0 128 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 INO80CQ6PI98 192 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 SCGB1D4Q6XE38 83 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 KDM8Q8N371 416 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 OR1F12Q8NHA8 337 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 PAQR8Q8TEZ7 354 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 ALKBH3Q96Q83 286 aaPredicted RBP5.65□□□□□ -1.51
CDKL5-205ENST00000623535 SLCO1B3Q9NPD5 702 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 FAM53CQ9NYF3 392 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 KLK11Q9UBX7 282 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 CDC42EP3Q9UKI2 254 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 V9GYS6 101 aa5.65□□□□□ -1.51
CDKL5-205ENST00000623535 PPIAL4EA0A075B759 164 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 A0A1B0GTQ1 180 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 PPIAL4DF5H284 164 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 PPP1R17O96001 155 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 RNASE1P07998 156 aaKnown RBP5.64□□□□□ -1.51
CDKL5-205ENST00000623535 PPIAL4FP0DN26 164 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF90Q03938 601 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 GLIS1Q8NBF1 620 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 OR2G2Q8NGZ5 317 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 KHSRPQ92945 711 aaKnown RBP eCLIP5.64□□□□□ -1.51
CDKL5-205ENST00000623535 FUNDC2Q9BWH2 189 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 PPIAL4AQ9Y536 164 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 C3orf80F5H4A9 247 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 PSMB5P28074 263 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 ATP5G2Q06055 141 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 PGGHGQ32M88 737 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 TMEM196Q5HYL7 178 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 OR8J2Q8NGG1 315 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 FAM213BQ8TBF2 198 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 GPR119Q8TDV5 335 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 CXorf58Q96LI9 332 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 SFXN3Q9BWM7 321 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 PRDM7Q9NQW5 492 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 TCRBV4S1A1TA0A5B7 111 aa5.64□□□□□ -1.51
CDKL5-205ENST00000623535 MRPS14O60783 128 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms