RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 HOGA1Q86XE5 327 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 MAML2Q8IZL2 1156 aaPredicted RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 SLC43A2Q8N370 569 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 SLC22A24Q8N4F4 322 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 OR13G1Q8NGZ3 307 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 ASB16Q96NS5 453 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 GPX7Q96SL4 187 aaPredicted RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 C14orf166Q9Y224 244 aaKnown RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 TRANK1O15050 2925 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 A0A0J9YY10 115 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 RAMP1O60894 148 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 IFNA17P01571 189 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 CTSEP14091 401 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 BLVRBP30043 206 aaPredicted RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 GPR3P46089 330 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 RNF151Q2KHN1 245 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 RPUSD3Q6P087 351 aaKnown RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 SMIM8Q96KF7 97 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 PLA2G2FQ9BZM2 168 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 OPN3Q9H1Y3 402 aaPredicted RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 SLC26A1Q9H2B4 701 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 SIRT7Q9NRC8 400 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 A0A0A6YYD4 124 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 EREGO14944 169 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 LDLRAD4O15165 306 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 LINC01565O15544 149 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 NOVA1P51513 510 aaKnown RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 TAS2R31P59538 309 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 NHLH2Q02577 135 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 PDCD1Q15116 288 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 SHHQ15465 462 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 CLEC12BQ2HXU8 276 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 SOHLH1Q5JUK2 328 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 TMEM244Q5VVB8 128 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 WDFY1Q8IWB7 410 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 ARHGAP21Q5T5U3 1957 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 TMED7-TICAM2A0A0A6YYA0 188 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 AHSA1O95433 338 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 ADH1BP00325 375 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 HEXAP06865 529 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 MELTFP08582 738 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 PET100P0DJ07 73 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 SLC6A9P48067 706 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 RAB5CP51148 216 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 EIF5AP63241 154 aaKnown RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 NAAAQ02083 359 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 MEX3BQ6ZN04 569 aaKnown RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 GKN2Q86XP6 184 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 C20orf196Q8IYI0 205 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 DEFB119Q8N690 84 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 OR5D14Q8NGL3 314 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 LIN37Q96GY3 246 aaPredicted RBP11.66□□□□□ -0.54
MSH6-214ENST00000616033 NELFAQ9H3P2 528 aa11.66□□□□□ -0.54
MSH6-214ENST00000616033 CD5P06127 495 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 ZNF708P17019 499 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 SULT1A2P50226 295 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 AFF3P51826 1226 aaKnown RBP11.65□□□□□ -0.54
MSH6-214ENST00000616033 RRADP55042 308 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 RAP1AP62834 184 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 HHEXQ03014 270 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 TEX30Q5JUR7 227 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 BTNL8Q6UX41 500 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 SUMF2Q8NBJ7 301 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 HPSE2Q8WWQ2 592 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 SAT2Q96F10 170 aaPredicted RBP11.65□□□□□ -0.54
MSH6-214ENST00000616033 RTBDNQ9BSG5 229 aaPredicted RBP11.65□□□□□ -0.54
MSH6-214ENST00000616033 ABHD14AQ9BUJ0 271 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 SEBOXQ9HB31 216 aaPredicted RBP11.65□□□□□ -0.54
MSH6-214ENST00000616033 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 METTL1Q9UBP6 276 aaKnown RBP11.65□□□□□ -0.54
MSH6-214ENST00000616033 MEMO1Q9Y316 297 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 IGHV3-20A0A0C4DH32 117 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 HOXB2P14652 356 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 AGAP20933 346 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 ANOS1P23352 680 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 TAGLN2P37802 199 aaKnown RBP11.65□□□□□ -0.54
MSH6-214ENST00000616033 SPNS3Q6ZMD2 512 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 ZNF2Q9BSG1 426 aaPredicted RBP11.65□□□□□ -0.54
MSH6-214ENST00000616033 PBOV1Q9GZY1 135 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 MMACHCQ9Y4U1 282 aa11.65□□□□□ -0.54
MSH6-214ENST00000616033 IGLV1-36A0A0B4J1U3 117 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 CST4P01036 141 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 IFNA21P01568 189 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 IGFBP3P17936 291 aaPredicted RBP11.64□□□□□ -0.55
MSH6-214ENST00000616033 CHD3Q12873 2000 aaKnown RBP11.64□□□□□ -0.55
MSH6-214ENST00000616033 AKR1C8PQ5T2L2 129 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 C1orf140Q5VVS0 124 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 Q6ZSR6 202 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 SLAMF6Q96DU3 332 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 BMFQ96LC9 184 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 S100A13Q99584 98 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 LPAR5Q9H1C0 372 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 DOK5Q9P104 306 aa11.64□□□□□ -0.55
MSH6-214ENST00000616033 NXT1Q9UKK6 140 aaKnown RBP11.64□□□□□ -0.55
MSH6-214ENST00000616033 TRAV36DV7A0A075B6V5 113 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms