RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 OR14C36Q8NHC7 312 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 OR2T6Q8NHC8 308 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 KIR2DS1A0A191URI9 304 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 PIPP12273 146 aaPredicted RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 KIR2DS4P43632 304 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 RELBQ01201 579 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 KIR2DS1Q14954 304 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 XKR7Q5GH72 579 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 SYT9Q86SS6 491 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 NETO1Q8TDF5 533 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 ALOXE3Q9BYJ1 711 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 CLEC18AA5D8T8 446 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 KDM4EB2RXH2 506 aaPredicted RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 SYNGR2O43760 224 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 PDE7AQ13946 482 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 C11orf87Q6NUJ2 197 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 CLEC18CQ8NCF0 446 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 SLC26A1Q9H2B4 701 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 PRTFDC1Q9NRG1 225 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 SPANXCQ9NY87 97 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 NXT1Q9UKK6 140 aaKnown RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 MEIKINA0A087WXM9 373 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 NDUFC2O95298 119 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 F7P08709 466 aaPredicted RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 RNF224P0DH78 156 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 GDF5P43026 501 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 SH2D5Q6ZV89 423 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 FAM57BQ71RH2 274 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 DUSP18Q8NEJ0 188 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 PTP4A1Q93096 173 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 TMED3Q9Y3Q3 217 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 DOCK1Q14185 1865 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 ARRDC5A6NEK1 342 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 HMSDA8MTL9 139 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 CR2P20023 1033 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 TBPL1P62380 186 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 RPS21P63220 83 aaKnown RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 TMEM201Q5SNT2 666 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 MUC15Q8N387 334 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 OR2K2Q8NGT1 345 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 MS4A3Q96HJ5 214 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 RBM24Q9BX46 236 aaKnown RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 TRIOBPQ9H2D6 2365 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 CTSAP10619 480 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 ARSIQ5FYB1 569 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 WDFY1Q8IWB7 410 aa8.42□□□□□ -1.06
COL12A1-211ENST00000615798 NAA50Q9GZZ1 169 aaKnown RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.42□□□□□ -1.06
COL12A1-211ENST00000615798 SHANK1Q9Y566 2161 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 FAM171A2A8MVW0 826 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 KIR2DL1P43626 348 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 KIR2DL2P43627 348 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 C18orf21Q32NC0 220 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 RAB33BQ9H082 229 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 TMEM269A0A1B0GVZ9 245 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 PQLC2LA1A4F0 135 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 EIF4E2O60573 245 aaKnown RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 SLC6A1P30531 599 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 VHLLQ6RSH7 139 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 LCORQ96JN0 433 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 GPR62Q9BZJ7 368 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 PRSS50Q9UI38 385 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 ENTPD2Q9Y5L3 495 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 MAN2B1O00754 1011 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 ACP5P13686 325 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 WIPI2Q9Y4P8 454 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 NKX6-3A6NJ46 265 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 SOX15O60248 233 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 TNFP01375 233 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 RAB38P57729 211 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 WDR89Q96FK6 387 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 TMEM38AQ9H6F2 299 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 GDE1Q9NZC3 331 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 KIAA1456Q9P272 454 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 C19orf53Q9UNZ5 99 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 ZNF860A6NHJ4 632 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 IGHG1P01857 330 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 FAHP16930 419 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 CCL23P55773 120 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 SIRPAP78324 504 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 PTPRCAPQ14761 206 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 PPP1R1CQ8WVI7 109 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 ZNF275Q9NSD4 429 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 CLN3Q13286 438 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 ZNF519Q8TB69 540 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 SRD5A3Q9H8P0 318 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 RCL1Q9Y2P8 373 aaKnown RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 SPINK4O60575 86 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 RPL30P62888 115 aaKnown RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 Q6ZVU0 165 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 OR1L4Q8NGR5 311 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 HGDQ93099 445 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 SLAMF6Q96DU3 332 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 A0A1W2PPC4 97 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 KLK3P07288 261 aaPredicted RBP8.41□□□□□ -1.06
COL12A1-211ENST00000615798 C21orf58P58505 322 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms