RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 A8MXK9 166 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 C17orf105B2RV13 164 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 ARPC3O15145 178 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 CD1AP06126 327 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 EN2P19622 333 aaPredicted RBP7.94□□□□□ -1.14
TTC28-208ENST00000612946 IGSF8Q969P0 613 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 TNFSF18Q9UNG2 199 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 FANCMQ8IYD8 2048 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 DOCK6Q96HP0 2047 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 LRRC3CA6NJW4 275 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 FRS3O43559 492 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 SMIM17P0DL12 118 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 HTR1DP28221 377 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 CD300CQ08708 224 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 OR2C3Q8N628 320 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 OR5C1Q8NGR4 320 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 TUBA4BQ9H853 241 aa7.94□□□□□ -1.14
TTC28-208ENST00000612946 ERHP84090 104 aaKnown RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 KLF9Q13886 244 aaPredicted RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 KCNAB1Q14722 419 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 DOLPP1Q86YN1 238 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 NUBPLQ8TB37 319 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 PECRQ9BY49 303 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 SFXN1Q9H9B4 322 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 RGPD3A6NKT7 1758 aaPredicted RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 RGPD4Q7Z3J3 1758 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CCL16O15467 120 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CTAG2O75638 210 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 RIGQ13278 110 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 MFSD12Q6NUT3 480 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 GATSQ8NAP1 163 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 TRAV9-1A0A075B6T8 112 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 FGF2P09038 288 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 ACAA2P42765 397 aaKnown RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 RABIFP47224 123 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 SUCLG1P53597 346 aaKnown RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 C18orf21Q32NC0 220 aaPredicted RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 MORN1Q5T089 497 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 TGIF2LXQ8IUE1 241 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 TMEM255BQ8WV15 326 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 IRF7Q92985 503 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 PTPRFP10586 1907 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CXorf51AA0A1B0GTR3 108 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 BMPR1BO00238 502 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 SLC35E2P0CK97 266 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 PPP1R1AQ13522 171 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 NHLRC3Q5JS37 347 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 NIT1Q86X76 327 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 ZNF480Q8WV37 535 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 SHDQ96IW2 340 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 MS4A8Q9BY19 250 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 UBTD1Q9HAC8 227 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 FTSJ1Q9UET6 329 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 NEU3Q9UQ49 428 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 DOCK4Q8N1I0 1966 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 SERTM1A2A2V5 107 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 TLCD2A6NGC4 264 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 C11orf94C9JXX5 98 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 BCL3P20749 454 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 KLF3P57682 345 aaPredicted RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 FAM78BQ5VT40 261 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 FIGLAQ6QHK4 219 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 H1FNTQ75WM6 255 aaPredicted RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 TNFRSF13CQ96RJ3 184 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 THBS4P35443 961 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CCR2P41597 374 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 HOXC5Q00444 222 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 SQSTM1Q13501 440 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 ZNF468Q5VIY5 522 aaPredicted RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 ZNF813Q6ZN06 617 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 OR2M3Q8NG83 312 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 RPS4Y2Q8TD47 263 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 S1PR5Q9H228 398 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 PRAMEF25A6NGN4 478 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 TMEM262E9PQX1 116 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 APCSP02743 223 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 APOBEC1P41238 236 aaKnown RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 OR1C1Q15619 314 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 MRPS24Q96EL2 167 aaKnown RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 BOCQ9BWV1 1114 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CXorf36Q9H7Y0 433 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 TCRBV16S1A1N1A0A5B0 115 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CTNSO60931 367 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 ACTL6AO96019 429 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 PIANPQ8IYJ0 282 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CRYGNQ8WXF5 182 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 C10orf35Q96D05 121 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 RTL8AQ9BWD3 113 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 A0A087WV62 115 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 OR2W5A6NFC9 320 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 CTSDP07339 412 aaPredicted RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 RPS4Y1P22090 263 aaKnown RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 ZNF789Q5FWF6 425 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 PRAMEF20Q5VT98 475 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 TMEM99Q8N816 258 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 OR5A1Q8NGJ0 315 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 PRSS3P2Q8NHM4 247 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 SMG9Q9H0W8 520 aaKnown RBP7.93□□□□□ -1.14
TTC28-208ENST00000612946 INSL5Q9Y5Q6 135 aa7.93□□□□□ -1.14
TTC28-208ENST00000612946 HOXD4P09016 255 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms