RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	PILRA	Q9UKJ1	303 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	MRPS18B	Q9Y676	258 aa	Known RBP	12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	TRIM64B	A6NI03	449 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	NMB	P08949	121 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	HIST1H1D	P16402	221 aa	Known RBP	12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	IL11	P20809	199 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	INPP5J	Q15735	1006 aa	Predicted RBP	12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	CEACAM16	Q2WEN9	425 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	C17orf78	Q8N4C9	275 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	OR5M8	Q8NGP6	311 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	ZNRF4	Q8WWF5	429 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	MALSU1	Q96EH3	234 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	RSRP1	Q9BUV0	290 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	KPTN	Q9Y664	436 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	PPP1R2P9	O14990	202 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	ARG1	P05089	322 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	GLB1	P16278	677 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	MOGAT2	Q3SYC2	334 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	PLXDC2	Q6UX71	529 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	CDC20B	Q86Y33	519 aa		12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	SLC25A43	Q8WUT9	341 aa	Predicted RBP	12.34	□□□□□ -0.43
MUC1-223	ENST00000611571	NYNRIN	Q9P2P1	1898 aa	Known RBP	12.34	□□□□□ -0.43
MUC1-223	ENST00000611571		A6NCN8	305 aa		12.33	□□□□□ -0.43
MUC1-223	ENST00000611571	ZXDA	P98168	799 aa		12.33	□□□□□ -0.43
MUC1-223	ENST00000611571	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.33	□□□□□ -0.43
MUC1-223	ENST00000611571	SSX9	Q7RTT3	188 aa		12.33	□□□□□ -0.43
MUC1-223	ENST00000611571	AICDA	Q9GZX7	198 aa		12.33	□□□□□ -0.43
MUC1-223	ENST00000611571		R4GN57	208 aa		12.33	□□□□□ -0.43
MUC1-223	ENST00000611571	LINC00862	A6NCI5	91 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	RECK	O95980	971 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	GSTP1	P09211	210 aa	Known RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	ADRA2C	P18825	462 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	PTAFR	P25105	342 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	CYB561	P49447	251 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	CCR5	P51681	352 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	TMEM255A	Q5JRV8	349 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571		Q7L0L9	218 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	SLC16A13	Q7RTY0	426 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	RPUSD4	Q96CM3	377 aa	Known RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	AMDHD2	Q9Y303	409 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571		A0A1W2PR80	420 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	IFNA10	P01566	189 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	NAT1	P18440	290 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	PTGFR	P43088	359 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	TLE4	Q04727	773 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	BAX	Q07812	192 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	DMBX1	Q8NFW5	382 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	MCHR2	Q969V1	340 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	MVB12A	Q96EY5	273 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	GPR137	Q96N19	417 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	GSTZ1	O43708	216 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	FAM157B	P0CG42	384 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	KIR3DL2	P43630	455 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	ZNF133	P52736	654 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	F2RL1	P55085	397 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	H2BFS	P57053	126 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	SKP2	Q13309	424 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	ZNF239	Q16600	458 aa	Known RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	GUSBP11	Q6P575	273 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	RGP1	Q92546	391 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	ADAT3	Q96EY9	351 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	PRRX2	Q99811	253 aa		12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	BOK	Q9UMX3	212 aa	Predicted RBP	12.33	□□□□□ -0.44
MUC1-223	ENST00000611571	IGHV1OR21-1	A0A087WYE8	117 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	PRSS44	E7EML9	344 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	SIRPB1	O00241	398 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	CPN1	P15169	458 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	INSM1	Q01101	510 aa	Predicted RBP	12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	PMP22	Q01453	160 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	WIPI1	Q5MNZ9	446 aa	Predicted RBP	12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	MRGPRX4	Q96LA9	322 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	ZNF831	Q5JPB2	1677 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	AQP8	O94778	261 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	GCH1	P30793	250 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	LIMK1	P53667	647 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	ARRDC1	Q8N5I2	433 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	FBXO17	Q96EF6	278 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	KIRREL1	Q96J84	757 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	UBL7	Q96S82	380 aa	Predicted RBP	12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	PATZ1	Q9HBE1	687 aa	Known RBP	12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	ICAM5	Q9UMF0	924 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	TRAV20	A0A0B4J274	112 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	HMSD	A8MTL9	139 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	ZNF814	B7Z6K7	855 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	BCKDHB	P21953	392 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	TGFBR3	Q03167	851 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	ZNF774	Q6NX45	483 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	TMEM65	Q6PI78	240 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	CLEC18B	Q6UXF7	455 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	INTS12	Q96CB8	462 aa	Known RBP	12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	SPACA9	Q96E40	222 aa	Predicted RBP	12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	CMTM3	Q96MX0	182 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	FBXL17	Q9UF56	701 aa		12.32	□□□□□ -0.44
MUC1-223	ENST00000611571	BRCA1	P38398	1863 aa	Known RBP	12.31	□□□□□ -0.44
MUC1-223	ENST00000611571	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.31	□□□□□ -0.44
MUC1-223	ENST00000611571	PIAS2	O75928	621 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms