RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PDCD1LG2Q9BQ51 273 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 CDCA4Q9BXL8 241 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 Q9H521 79 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 DUSP21Q9H596 190 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 TMEM100Q9NV29 134 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 ERVK-18Q9QC07 812 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 IL19Q9UHD0 177 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 CDC42EP3Q9UKI2 254 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 PIGLQ9Y2B2 252 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 NPTNQ9Y639 398 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 SIRT4Q9Y6E7 314 aaPredicted RBP7.26□□□□□ -1.25
SNCA-212ENST00000611107 A0A1B0GVI7 797 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 A6NIN4 97 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 TMEM212A6NML5 194 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 ANKRD30BLA7E2S9 258 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 ZNF850A8MQ14 1090 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 B4DSR2 109 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 PTGES3LE9PB15 166 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 F5H0A9 414 aaPredicted RBP7.25□□□□□ -1.25
SNCA-212ENST00000611107 TMEM178BH3BS89 294 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 SYT7O43581 403 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 GMDSO60547 372 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 CST4P01036 141 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 ATP6V1B1P15313 513 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 SRD5A1P18405 259 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 TNFSF4P23510 183 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 THBS2P35442 1172 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 MAP2K3P46734 347 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 WNT4P56705 351 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 GABARAPL2P60520 117 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 LCN2P80188 198 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 MRPL28Q13084 256 aaKnown RBP7.25□□□□□ -1.25
SNCA-212ENST00000611107 PRDX4Q13162 271 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 HFEQ30201 348 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 DMRTC1Q5HYR2 192 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 RBM48Q5RL73 367 aaKnown RBP7.25□□□□□ -1.25
SNCA-212ENST00000611107 ZBTB37Q5TC79 503 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 RNLSQ5VYX0 342 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 TMPRSS11AQ6ZMR5 421 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 ZNF826PQ6ZT77 177 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 ZDHHC23Q8IYP9 409 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 FGFRL1Q8N441 504 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 NANOGP1Q8N7R0 232 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 ZFP41Q8N8Y5 198 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 SEMA6DQ8NFY4 1073 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 GATAD2BQ8WXI9 593 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 MYDGFQ969H8 173 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 SMIM19Q96E16 107 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 PGLYRP3Q96LB9 341 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 OR5M11Q96RB7 305 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 MYCBPQ99417 103 aaPredicted RBP7.25□□□□□ -1.25
SNCA-212ENST00000611107 EGLN1Q9GZT9 426 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 SLC22A4Q9H015 551 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 TMEM165Q9HC07 324 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 TRIM36Q9NQ86 728 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 UFSP2Q9NUQ7 469 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 SCN3BQ9NY72 215 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 TPRKBQ9Y3C4 175 aa7.25□□□□□ -1.25
SNCA-212ENST00000611107 A0A1B0GW55 424 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 ISPDA4D126 451 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 RGS10O43665 173 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 MTRF1O75570 445 aaKnown RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 VENTXO95231 258 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 FSHBP01225 129 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 TFF1P04155 84 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4L2P0CJ85 424 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4L3P0CJ86 424 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4L4P0CJ87 422 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4L5P0CJ88 424 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4L6P0CJ89 424 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4L7P0CJ90 424 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 EGR1P18146 543 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 TNFRSF1AP19438 455 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 GNALP38405 381 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 SRP9P49458 86 aaKnown RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 GBX2P52951 348 aaPredicted RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 PAX2Q02962 417 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 RIPPLY1Q0D2K3 151 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 ZNF154Q13106 437 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 MED21Q13503 144 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 TBCEQ15813 527 aaPredicted RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 CCDC58Q4VC31 144 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 CEP78Q5JTW2 689 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 TMEM244Q5VVB8 128 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DMKNQ6E0U4 476 aaPredicted RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 ASPHD2Q6ICH7 369 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 RPL22L1Q6P5R6 122 aaKnown RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4L9Q6RFH8 374 aaPredicted RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 PRSS48Q7RTY5 328 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 LRRC28Q86X40 367 aaPredicted RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 C11orf53Q8IXP5 236 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 FTMTQ8N4E7 242 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 CELF2-AS1Q8N7Q2 184 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 OR13C5Q8NGS8 318 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 Q8TCH9 128 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 HAVCR2Q8TDQ0 301 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 OR5P3Q8WZ94 311 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 SEH1LQ96EE3 360 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 ADAT3Q96EY9 351 aaPredicted RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 GAL3ST1Q99999 423 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms