RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 EIF1AYO14602 144 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 PCDH7O60245 1069 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 KLK8O60259 260 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SEMA4FO95754 770 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 CHRM2P08172 466 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 FAM87AP0C7U9 286 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 EIF1AXP47813 144 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SCAND1P57086 179 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 UBE2MP61081 183 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 MIDNQ504T8 468 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF585BQ52M93 769 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 C4orf17Q53FE4 359 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SPANXN4Q5MJ08 99 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM42Q69YG0 159 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 NIPAL3Q6P499 406 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 PARS2Q7L3T8 475 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 CMTM4Q8IZR5 234 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 OR2C3Q8N628 320 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 DCUN1D4Q92564 292 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 CAPNS2Q96L46 248 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SPATA25Q9BR10 227 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 DUSP23Q9BVJ7 150 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SMG9Q9H0W8 520 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 RAB18Q9NP72 206 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 GULP1Q9UBP9 304 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 MTFP1Q9UDX5 166 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF107Q9UII5 783 aaPredicted RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 AK6Q9Y3D8 172 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 HELZP42694 1942 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 ANKRD36A6QL64 1941 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 OR6C6A6NF89 314 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 ARL5CA6NH57 179 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM229AB2RXF0 380 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 ADAM20O43506 726 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SNAI2O43623 268 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 S1PR2O95136 353 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 CDS2O95674 445 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 IL2RAP01589 272 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 AKAIN1P0CW23 69 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 PPIBP23284 216 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SLC25A1P53007 311 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 CLDN15P56746 228 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 TAS2R43P59537 309 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 TTLL4Q14679 1199 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SRSF7Q16629 238 aaKnown RBP eCLIP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 PTPRNQ16849 979 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SLC25A35Q3KQZ1 300 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 MRGPREQ86SM8 312 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 ACOT1Q86TX2 421 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 OR8I2Q8N0Y5 310 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 GPR32P1Q8NGA4 272 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 OR4N2Q8NGD1 307 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 OR4C16Q8NGL9 310 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SEH1LQ96EE3 360 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 DAZAP1Q96EP5 407 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 UBE2ZQ9H832 354 aaPredicted RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 MRM2Q9UI43 246 aaKnown RBP7.86□□□□□ -1.15
COMMD3-215ENST00000602574 MPPED1O15442 326 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 HYPMO75409 117 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 JTBO76095 146 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 DANCRP0C864 163 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 PRLHRP49683 370 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 BTN3A2P78410 334 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ARG2P78540 354 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 SMAGPQ0VAQ4 97 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 GAGE5Q13069 117 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 GAGE6Q13070 117 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 GNMTQ14749 295 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 PDGFRLQ15198 375 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 EXT1Q16394 746 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM41BQ5BJD5 291 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ACTL10Q5JWF8 245 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 RNFT1Q5M7Z0 435 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 C1QL3Q5VWW1 255 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 RAET1LQ5VY80 246 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 TRNP1Q6NT89 227 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 LEG1Q6P5S2 330 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF322Q6U7Q0 402 aaPredicted RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 Q6ZN92 141 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 GATSQ8NAP1 163 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 OR1B1Q8NGR6 318 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 SLC25A43Q8WUT9 341 aaPredicted RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 GALMQ96C23 342 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 NSUN5Q96P11 429 aaKnown RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 DCBLD2Q96PD2 775 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF649Q9BS31 505 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 NIPSNAP3BQ9BS92 247 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 PAM16Q9Y3D7 125 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 CSAG2Q9Y5P2 127 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 SHROOM3Q8TF72 1996 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 IGKV6D-21A0A0A0MT36 114 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 TRAF3IP2O43734 574 aaPredicted RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 B4GALT3O60512 393 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 MSCO60682 206 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 HAND1O96004 215 aa7.85□□□□□ -1.15
COMMD3-215ENST00000602574 CSTBP04080 98 aaKnown RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 HSPB1P04792 205 aaKnown RBP7.85□□□□□ -1.15
COMMD3-215ENST00000602574 SEC11BP0C7V7 166 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms