RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 OR8B12Q8NGG6 310 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 TEX47Q8TBZ9 253 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 C17orf50Q8WW18 174 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 PIGCQ92535 297 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 MED30Q96HR3 178 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 RNF170Q96K19 258 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 ABCB9Q9NP78 766 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 ZNF222Q9UK12 451 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 MAB21L2Q9Y586 359 aa14.7□□□□□ -0.06
CHMP2A-208ENST00000601220 IGKV1D-17A0A075B6S4 117 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 ARRDC5A6NEK1 342 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 RHBDL1O75783 438 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 GK3PQ14409 553 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 FAM98BQ52LJ0 330 aaKnown RBP14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 PLBD1Q6P4A8 553 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 OR5R1Q8NH85 324 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 GIPC3Q8TF64 312 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 THEM6Q8WUY1 208 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 H1FXQ92522 213 aaKnown RBP14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 UBE2FQ969M7 185 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 OTULINQ96BN8 352 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 OR51I2Q9H344 312 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 NLKQ9UBE8 527 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 FBLN5Q9UBX5 448 aa14.69□□□□□ -0.06
CHMP2A-208ENST00000601220 MEIOCA2RUB1 952 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 MEGF11A6BM72 1044 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 NKX6-3A6NJ46 265 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 OR2AT4A6NND4 320 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 H3BN98 237 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 RAP2AP10114 183 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 ALOX5APP20292 161 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 MNAT1P51948 309 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 PSMA6P60900 246 aaKnown RBP14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 EGR3Q06889 387 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 ACSM1Q08AH1 577 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 GINS1Q14691 196 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 ZDHHC23Q8IYP9 409 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 BEND2Q8NDZ0 799 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 PPP1R35Q8TAP8 253 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 DUS3LQ96G46 650 aaKnown RBP14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 METTL8Q9H825 291 aaKnown RBP14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 TAS2R1Q9NYW7 299 aa14.68□□□□□ -0.06
CHMP2A-208ENST00000601220 BTBD17A6NE02 478 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 PRR23D1E9PI22 279 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 PRR23D2P0DMB1 279 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 PSG2P11465 335 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 NDUFB7P17568 137 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 SLC2A5P22732 501 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 GPM6AP51674 278 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 HCCSP53701 268 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 GNGT1P63211 74 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 CDK5Q00535 292 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 NCR3LG1Q68D85 454 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 CRIP3Q6Q6R5 217 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 KCTD8Q6ZWB6 473 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 CPOQ8IVL8 374 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 ADGRG5Q8IZF4 528 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 ZNRF1Q8ND25 227 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 BBS1Q8NFJ9 593 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 FAM110DQ8TAY7 271 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 SDSLQ96GA7 329 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 NSL1Q96IY1 281 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 CHID1Q9BWS9 393 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 NIPAL2Q9H841 368 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 ELL3Q9HB65 397 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 LRP12Q9Y561 859 aa14.67□□□□□ -0.06
CHMP2A-208ENST00000601220 PRODHO43272 600 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 IGLV3-1P01715 115 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 T-ENOLP0DO92 83 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 PAICSP22234 425 aaKnown RBP14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 GLRA1P23415 457 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 POU1F1P28069 291 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 CEACAM21Q3KPI0 293 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 TRPM8Q7Z2W7 1104 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 C1QL4Q86Z23 238 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 C11orf42Q8N5U0 333 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 AQP3Q92482 292 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 MEGF9Q9H1U4 602 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 PPA2Q9H2U2 334 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 FAM206AQ9NX38 181 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 SIGLEC9Q9Y336 463 aa14.66□□□□□ -0.06
CHMP2A-208ENST00000601220 A0A0U1RQV5 110 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 ACOD1A6NK06 481 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 PRR32B1ATL7 298 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 ZNF732B4DXR9 585 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 PAHP00439 452 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 CST1P01037 141 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 GABRA2P47869 451 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 GNG3P63215 75 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 DMRTC1Q5HYR2 192 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 SLC35D3Q5M8T2 416 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 RORBQ92753 470 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 ASB9Q96DX5 294 aa14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 SF3B6Q9Y3B4 125 aaKnown RBP14.65□□□□□ -0.06
CHMP2A-208ENST00000601220 TRBV23-1A0A0A0MS06 115 aa14.64□□□□□ -0.07
CHMP2A-208ENST00000601220 A0A1W2PQ09 198 aa14.64□□□□□ -0.07
CHMP2A-208ENST00000601220 H3BUX3 64 aa14.64□□□□□ -0.07
CHMP2A-208ENST00000601220 MTRF1O75570 445 aaKnown RBP14.64□□□□□ -0.07
CHMP2A-208ENST00000601220 HMGN1P05114 100 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms