RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 UBCP0CG48 685 aaKnown RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 ZNF19P17023 458 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 GATA3P23771 443 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 ZFP36P26651 326 aaKnown RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 CFHR2P36980 270 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 CAPGP40121 348 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 KIR3DL2P43630 455 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 GPM6AP51674 278 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 SEC61A1P61619 476 aaKnown RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 GNG3P63215 75 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 HOXA4Q00056 320 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 SMN1Q16637 294 aaKnown RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 FAM76BQ5HYJ3 339 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 CLVS2Q5SYC1 327 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 DCAF12L2Q5VW00 463 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 PLCXD3Q63HM9 321 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 SFRP4Q6FHJ7 346 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 FAHD2BQ6P2I3 314 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 FDX2Q6P4F2 183 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 PRIMA1Q86XR5 153 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 EGFL6Q8IUX8 553 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 OR5A2Q8NGI9 324 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 OR2G2Q8NGZ5 317 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 CNIH3Q8TBE1 160 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 RPL3LQ92901 407 aaKnown RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 RNF166Q96A37 237 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 FAHD2AQ96GK7 314 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 C4orf36Q96KX1 117 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 ALG8Q9BVK2 526 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 ERVK13-1Q9NX77 482 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 POLR3KQ9Y2Y1 108 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-215ENST00000601150 HSPE1-MOB4S4R3N1 261 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 WNK2Q9Y3S1 2297 aa14.08□□□□□ -0.15
TRIM28-215ENST00000601150 PPIAL4CA0A0B4J2A2 164 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 ZNF732B4DXR9 585 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 J3QLI3 93 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 PHF1O43189 567 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-215ENST00000601150 SYT7O43581 403 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 NDUFA2O43678 99 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 IFNA2P01563 188 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 HTR1AP08908 422 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 EGR1P18146 543 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 SRP14P37108 136 aaKnown RBP14.08□□□□□ -0.16
TRIM28-215ENST00000601150 TMEM42Q69YG0 159 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 LYPD2Q6UXB3 125 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 SYS1Q8N2H4 156 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 SCCPDHQ8NBX0 429 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 OR10Z1Q8NGY1 313 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 PELI1Q96FA3 418 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 SSBP3Q9BWW4 388 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-215ENST00000601150 PLEKHA1Q9HB21 404 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 FGF20Q9NP95 211 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-215ENST00000601150 OR5V1Q9UGF6 321 aa14.08□□□□□ -0.16
TRIM28-215ENST00000601150 JMJD1CQ15652 2540 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 LOC107986453A0A1B0GWG9 222 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 IRGMA1A4Y4 181 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 KIAA1324LA8MWY0 1029 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-215ENST00000601150 ZNF12P17014 697 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 PITPNBP48739 271 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 CCR9P51686 369 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 GNB2P62879 340 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 TMEM244Q5VVB8 128 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 TEX36Q5VZQ5 186 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 FAM90A1Q86YD7 464 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 C8orf59Q8N0T1 100 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-215ENST00000601150 TEX29Q8N6K0 151 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 ZNF649Q9BS31 505 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 JAM3Q9BX67 310 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 TMPRSS13Q9BYE2 586 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 OR51I2Q9H344 312 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 FRRS1LQ9P0K9 344 aa14.07□□□□□ -0.16
TRIM28-215ENST00000601150 IGHV3OR15-7A0A075B7D8 119 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 A6NIN4 97 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 SRRM5B3KS81 715 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 TRAPPC2LH3BP13 241 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 H3BSH0 61 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 ADAM20O43506 726 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 GYPAP02724 150 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 ISG15P05161 165 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 MUC1P15941 1255 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-215ENST00000601150 NANOS3P60323 173 aaKnown RBP14.06□□□□□ -0.16
TRIM28-215ENST00000601150 MRPL28Q13084 256 aaKnown RBP14.06□□□□□ -0.16
TRIM28-215ENST00000601150 MICBQ29980 383 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 DMRTC1Q5HYR2 192 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 ISG20L2Q9H9L3 353 aaKnown RBP14.06□□□□□ -0.16
TRIM28-215ENST00000601150 GPR173Q9NS66 373 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 CLN8Q9UBY8 286 aa14.06□□□□□ -0.16
TRIM28-215ENST00000601150 ANKRD61A6NGH8 418 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 H0YHG0 523 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-215ENST00000601150 TNFRSF13BO14836 293 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-215ENST00000601150 GNAO1P09471 354 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 LIMS3P0CW19 117 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 LIMS4P0CW20 117 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 DCKP27707 260 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 ALKBH1Q13686 389 aaKnown RBP14.05□□□□□ -0.16
TRIM28-215ENST00000601150 WDR25Q64LD2 544 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-215ENST00000601150 RDH10Q8IZV5 341 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 HAVCR2Q8TDQ0 301 aa14.05□□□□□ -0.16
TRIM28-215ENST00000601150 C10orf35Q96D05 121 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms