RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 IGHV3-64DA0A0J9YX35 117 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 PCNX2A6NKB5 2137 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 NTF4P34130 210 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 GRB2P62993 217 aaKnown RBP10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 RAC1P63000 192 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 ENDOGQ14249 297 aaKnown RBP10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLC25A53Q5H9E4 307 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 ATP1A1-AS1Q5TC04 95 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 SPICQ8N5J4 248 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR5H2Q8NGV7 314 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 PIGCQ92535 297 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 TOMM40LQ969M1 308 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 SPTSSAQ969W0 71 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 LYZL4Q96KX0 146 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 C12orf57Q99622 126 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 STRADBQ9C0K7 418 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR10A2Q9H208 303 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLC17A5Q9NRA2 495 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF581Q9P0T4 197 aa10.12□□□□□ -0.79
ARHGEF1-220ENST00000600274 CCDC163A0A0D9SF12 145 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 KRBOX1C9JBD0 128 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 YKT6O15498 198 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PMS2P2O95744 297 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 CPN1P15169 458 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 FOSL1P15407 271 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF17P17021 662 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 CTRB1P17538 263 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ATP1B3P54709 279 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 SCAND1P57086 179 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 MICBQ29980 383 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ABHD17BQ5VST6 288 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 CTRB2Q6GPI1 263 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 TMEM17Q86X19 198 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PXT1Q8NFP0 134 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PPP1R1CQ8WVI7 109 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PNPLA2Q96AD5 504 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLC25A21Q9BQT8 299 aaPredicted RBP10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 SCPEP1Q9HB40 452 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PNRC2Q9NPJ4 139 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PLEKHJ1Q9NW61 149 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 KCNMB2Q9Y691 235 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PLSCR5A0PG75 271 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR5H14A6NHG9 310 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 F8W036 122 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 HSPB6O14558 160 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 SERPINA5P05154 406 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 HOXB5P09067 269 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PVALBP20472 110 aaPredicted RBP10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ADH6P28332 368 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 BLOC1S1P78537 153 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLC23A3Q6PIS1 610 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 M1APQ8TC57 530 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PARP12Q9H0J9 701 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 METTL8Q9H825 291 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 EMC3Q9P0I2 261 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 DOCK10Q96BY6 2186 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ICE1Q9Y2F5 2266 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 LOC102723996A0A087X1L8 192 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 SSX5O60225 188 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ADAP1O75689 374 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ITGB2P05107 769 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PTGFRP43088 359 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 RRADP55042 308 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 FXYD4P59646 89 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 RSU1Q15404 277 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 CDCP2Q5VXM1 449 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 ALKBH2Q6NS38 261 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 AQP3Q92482 292 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 PRR14LQ5THK1 2151 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 CPAMD8Q8IZJ3 1885 aa10.11□□□□□ -0.79
ARHGEF1-220ENST00000600274 LAMA5O15230 3695 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 GPR31O00270 319 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 SFTPBP07988 381 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZP3P21754 424 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 AKR1C3P42330 323 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 TMEM50BP56557 158 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 S100A10P60903 97 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 MEF2DQ14814 521 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 CHRFAM7AQ494W8 412 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 PGAP1Q75T13 922 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZIC4Q8N9L1 334 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 FGFBP3Q8TAT2 258 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 VRK1Q99986 396 aaPredicted RBP10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 PCDHGA1Q9Y5H4 931 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 NBEAQ8NFP9 2946 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 IGLV3-32A0A0A0MS00 114 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 A0A0B4J2A0 478 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 LDLRAD4O15165 306 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 DKK1O94907 266 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 NR2C1P13056 603 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 HIST1H1DP16402 221 aaKnown RBP10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF273Q14593 569 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 TMEM164Q5U3C3 297 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR14K1Q8NGZ2 314 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 LILRB1Q8NHL6 650 aaPredicted RBP10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 THAP6Q8TBB0 222 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 REEP6Q96HR9 211 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 PHB2Q99623 299 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms