RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 C1orf229Q6ZS94 237 aaPredicted RBP11.79□□□□□ -0.52
LIG1-218ENST00000599322 KCTD20Q7Z5Y7 419 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 PQLC1Q8N2U9 271 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 SCCPDHQ8NBX0 429 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 ZNF555Q8NEP9 628 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 MED30Q96HR3 178 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 SLC7A11Q9UPY5 501 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 IGHV3OR15-7A0A075B7D8 119 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 A0A1W2PQL4 384 aaPredicted RBP11.78□□□□□ -0.52
LIG1-218ENST00000599322 DAPL1A0PJW8 107 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 DHRS7CA6NNS2 312 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 SYT7O43581 403 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 RGS9O75916 674 aaPredicted RBP11.78□□□□□ -0.52
LIG1-218ENST00000599322 TTRP02766 147 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 GLRA1P23415 457 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 BPIFB3P59826 476 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 HILS1P60008 231 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 GMFBP60983 142 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 SNRPGP62308 76 aaKnown RBP11.78□□□□□ -0.52
LIG1-218ENST00000599322 ACTG1P63261 375 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 OCLNQ16625 522 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 CEP78Q5JTW2 689 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 GPR157Q5UAW9 335 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 FAM90A1Q86YD7 464 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 ZNF573Q86YE8 665 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 CMTM4Q8IZR5 234 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 ST8SIA4Q92187 359 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 RPL3LQ92901 407 aaKnown RBP11.78□□□□□ -0.52
LIG1-218ENST00000599322 TMIGD2Q96BF3 282 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 RNFT2Q96EX2 444 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 SLC6A7Q99884 636 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 DNTTIP1Q9H147 329 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 TLNRD1Q9H1K6 362 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 MRM2Q9UI43 246 aaKnown RBP11.78□□□□□ -0.52
LIG1-218ENST00000599322 GNG8Q9UK08 70 aa11.78□□□□□ -0.52
LIG1-218ENST00000599322 SRRM5B3KS81 715 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 P2RY10O00398 339 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 DLGAP1O14490 977 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 DVL1O14640 695 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 MAGEB4O15481 346 aaPredicted RBP11.77□□□□□ -0.53
LIG1-218ENST00000599322 APOL3O95236 402 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 OCM2P0CE71 109 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 OCMP0CE72 109 aaPredicted RBP11.77□□□□□ -0.53
LIG1-218ENST00000599322 FAHP16930 419 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 MFGE8Q08431 387 aaPredicted RBP11.77□□□□□ -0.53
LIG1-218ENST00000599322 FAM76BQ5HYJ3 339 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 SLC25A30Q5SVS4 291 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 C11orf53Q8IXP5 236 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 C22orf15Q8WYQ4 148 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 UPRTQ96BW1 309 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 CCL13Q99616 98 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 RASL12Q9NYN1 266 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 POLDIP2Q9Y2S7 368 aa11.77□□□□□ -0.53
LIG1-218ENST00000599322 ZNF879B4DU55 563 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 AKR7A2O43488 359 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 ENTPD6O75354 484 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 GATBO75879 557 aaKnown RBP11.76□□□□□ -0.53
LIG1-218ENST00000599322 TOX4O94842 621 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 FADS2O95864 444 aaKnown RBP11.76□□□□□ -0.53
LIG1-218ENST00000599322 RPSAP08865 295 aaKnown RBP11.76□□□□□ -0.53
LIG1-218ENST00000599322 UBCP0CG48 685 aaKnown RBP11.76□□□□□ -0.53
LIG1-218ENST00000599322 EGR1P18146 543 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 GABRA2P47869 451 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 FGF12P61328 243 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 ACTA2P62736 377 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 ACTG2P63267 376 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 WDR38Q5JTN6 314 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 HAGHLQ6PII5 290 aaPredicted RBP11.76□□□□□ -0.53
LIG1-218ENST00000599322 ZNF841Q6ZN19 808 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 BTN2A1Q7KYR7 527 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 ACBD7Q8N6N7 88 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 PPP1R14AQ96A00 147 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 PCGF1Q9BSM1 259 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 RASSF4Q9H2L5 321 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 OR51I2Q9H344 312 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 ZMAT3Q9HA38 289 aaKnown RBP11.76□□□□□ -0.53
LIG1-218ENST00000599322 NEK6Q9HC98 313 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 C8orf4Q9NR00 106 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 NLKQ9UBE8 527 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 SLC22A13Q9Y226 551 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 V9GYS6 101 aa11.76□□□□□ -0.53
LIG1-218ENST00000599322 LOC100130705A0A1B0GUX0 176 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 PRR32B1ATL7 298 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 VENTXO95231 258 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 FSHBP01225 129 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 IGLV3-1P01715 115 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 IL13RA1P78552 427 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 IKZF1Q13422 519 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 BLMHQ13867 455 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 PDCD1Q15116 288 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 KLHL22Q53GT1 634 aa11.75□□□□□ -0.53
LIG1-218ENST00000599322 C12orf54Q6X4T0 127 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms