RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ETV7Q9Y603 341 aa13.21□□□□□ -0.29
UPF1-206ENST00000598471 C19orf84I3L1E1 186 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 LILRA1O75019 489 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 OR4A8P0C604 315 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 UBBP0CG47 229 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 THBS2P35442 1172 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 EVX1P49640 407 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 GNG3P63215 75 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 P2RY14Q15391 338 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 ALKBH6Q3KRA9 238 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 FAM166AQ6J272 317 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 LYPD6Q86Y78 171 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 HPSE2Q8WWQ2 592 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 ITPKCQ96DU7 683 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 RNF170Q96K19 258 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 SPACA5Q96QH8 159 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 TMEM204Q9BSN7 226 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 MRPL37Q9BZE1 423 aaKnown RBP13.2□□□□□ -0.3
UPF1-206ENST00000598471 CNTD2Q9H8S5 307 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 LIN7BQ9HAP6 207 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 C14orf119Q9NWQ9 140 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 TAAR3PQ9P1P4 343 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 GHRLQ9UBU3 117 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 SPATA2Q9UM82 520 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 MRPS28Q9Y2Q9 187 aaKnown RBP13.2□□□□□ -0.3
UPF1-206ENST00000598471 ANKHD1Q8IWZ3 2542 aaKnown RBP13.2□□□□□ -0.3
UPF1-206ENST00000598471 PRR14LQ5THK1 2151 aa13.2□□□□□ -0.3
UPF1-206ENST00000598471 HEATR1Q9H583 2144 aaKnown RBP13.19□□□□□ -0.3
UPF1-206ENST00000598471 PQLC2LA1A4F0 135 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 ZNF732B4DXR9 585 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 PRSS44E7EML9 344 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 E7EQL1 145 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 SIAH2O43255 324 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 BPNT1O95861 308 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 SNRPBP14678 240 aaKnown RBP13.19□□□□□ -0.3
UPF1-206ENST00000598471 ARSBP15848 533 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 APOBEC3AP31941 199 aaPredicted RBP13.19□□□□□ -0.3
UPF1-206ENST00000598471 BMXP51813 675 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 CLDN12P56749 244 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 ADIPOQQ15848 244 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 MSMPQ1L6U9 139 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 ZNF672Q499Z4 452 aaPredicted RBP13.19□□□□□ -0.3
UPF1-206ENST00000598471 DMRTC1Q5HYR2 192 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 AWAT2Q6E213 333 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 ZNF573Q86YE8 665 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 OR6Q1Q8NGQ2 317 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 LGALS14Q8TCE9 139 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 TNFAIP8L1Q8WVP5 186 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 DVL3Q92997 716 aaPredicted RBP13.19□□□□□ -0.3
UPF1-206ENST00000598471 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 FAM3DQ96BQ1 224 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 DHRS9Q9BPW9 319 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 CXXC4Q9H2H0 198 aa13.19□□□□□ -0.3
UPF1-206ENST00000598471 HELZ2Q9BYK8 2649 aaKnown RBP13.19□□□□□ -0.3
UPF1-206ENST00000598471 LOC100289279A0A1B0GTE1 492 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 CYB5AP00167 134 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 PAHP00439 452 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 LOXP28300 417 aaPredicted RBP13.18□□□□□ -0.3
UPF1-206ENST00000598471 SERPINF1P36955 418 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 PTGFRP43088 359 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 OR3A4PP47883 348 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 POU3F4P49335 361 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 GPM6AP51674 278 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 LSAMPQ13449 338 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 DAZAP2Q15038 168 aaPredicted RBP13.18□□□□□ -0.3
UPF1-206ENST00000598471 TMEM255AQ5JRV8 349 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 ANGPTL5Q86XS5 388 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 OR4D6Q8NGJ1 314 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 TBC1D15Q8TC07 691 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 CMTM3Q96MX0 182 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 PSMG3-AS1Q96PY0 264 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 HS3ST6Q96QI5 342 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 PPP1R3EQ9H7J1 279 aa13.18□□□□□ -0.3
UPF1-206ENST00000598471 CISD1Q9NZ45 108 aaKnown RBP13.18□□□□□ -0.3
UPF1-206ENST00000598471 A0A0B4J203 849 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 A0A1B0GWJ7 208 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 FAM25AB3EWG3 89 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 FAM25CB3EWG5 89 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 FAM25GB3EWG6 89 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 CTDSP2O14595 271 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 TNFSF4P23510 183 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 ZNF81P51508 661 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 MMP15P51511 669 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 EFNB3Q15768 340 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 UBE2NLQ5JXB2 153 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 GLIPR1L1Q6UWM5 242 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 LRRC28Q86X40 367 aaPredicted RBP13.17□□□□□ -0.3
UPF1-206ENST00000598471 FBXL14Q8N1E6 418 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 ZSCAN4Q8NAM6 433 aaPredicted RBP13.17□□□□□ -0.3
UPF1-206ENST00000598471 OR10AD1Q8NGE0 317 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 OR5D18Q8NGL1 313 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 S100ZQ8WXG8 99 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 SLC25A28Q96A46 364 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 WDFY2Q96P53 400 aa13.17□□□□□ -0.3
UPF1-206ENST00000598471 DIRC2Q96SL1 478 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms