RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 CEACAM18A8MTB9 384 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 CDIPTO14735 213 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 NDUFA2O43678 99 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 PLPP2O43688 288 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 ZNF205O95201 554 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 PIPP12273 146 aaPredicted RBP15.28■□□□□ 0.04
ZNF558-204ENST00000596172 NANOS3P60323 173 aaKnown RBP15.28■□□□□ 0.04
ZNF558-204ENST00000596172 LAIR2Q6ISS4 152 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 WDR82Q6UXN9 313 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 DCDC5Q6ZRR9 648 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 MOB3CQ70IA8 216 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 OR10Z1Q8NGY1 313 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 OR51I2Q9H344 312 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 ISG20L2Q9H9L3 353 aaKnown RBP15.28■□□□□ 0.04
ZNF558-204ENST00000596172 HIF1ANQ9NWT6 349 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 CNOT2Q9NZN8 540 aaKnown RBP15.28■□□□□ 0.04
ZNF558-204ENST00000596172 CAB39Q9Y376 341 aaPredicted RBP15.28■□□□□ 0.04
ZNF558-204ENST00000596172 ABCA2Q9BZC7 2435 aa15.28■□□□□ 0.04
ZNF558-204ENST00000596172 TRAV38-1A0A0B4J264 116 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 LOC107986453A0A1B0GWG9 222 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 hCG_1807616A0A1W2PRN6 198 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 EFCAB10A6NFE3 127 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 OR4C45A6NMZ5 311 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 ZNF732B4DXR9 585 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 TNFRSF13BO14836 293 aaPredicted RBP15.27■□□□□ 0.04
ZNF558-204ENST00000596172 FOXH1O75593 365 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 TGM4P49221 684 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 GPM6AP51674 278 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 GBX2P52951 348 aaPredicted RBP15.27■□□□□ 0.04
ZNF558-204ENST00000596172 AQP4P55087 323 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 CSNK2BP67870 215 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 ALKBH1Q13686 389 aaKnown RBP15.27■□□□□ 0.04
ZNF558-204ENST00000596172 ODF4Q2M2E3 257 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 CEP78Q5JTW2 689 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 TEX36Q5VZQ5 186 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 RDH10Q8IZV5 341 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 SCCPDHQ8NBX0 429 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 GGHQ92820 318 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 POM121Q96HA1 1249 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 TMEM80Q96HE8 168 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 LRCH1Q9Y2L9 728 aa15.27■□□□□ 0.04
ZNF558-204ENST00000596172 EXOSC1Q9Y3B2 195 aaKnown RBP15.27■□□□□ 0.04
ZNF558-204ENST00000596172 MALRD1Q5VYJ5 2156 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 NAV3Q8IVL0 2385 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 OOEPA6NGQ2 149 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 A8MXK9 166 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 MUC1P15941 1255 aaPredicted RBP15.26■□□□□ 0.03
ZNF558-204ENST00000596172 GATA3P23771 443 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 ETV1P50549 477 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 MED21Q13503 144 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 CR1LQ2VPA4 569 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 CHRFAM7AQ494W8 412 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 FAM120AOSQ5T036 256 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 PLCXD3Q63HM9 321 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 TMPRSS11AQ6ZMR5 421 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 KCTD8Q6ZWB6 473 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 LRRC29Q8WV35 223 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 RPL3LQ92901 407 aaKnown RBP15.26■□□□□ 0.03
ZNF558-204ENST00000596172 NEIL1Q96FI4 390 aaPredicted RBP15.26■□□□□ 0.03
ZNF558-204ENST00000596172 TECTBQ96PL2 329 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 SHARPINQ9H0F6 387 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 LPAR2Q9HBW0 351 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 PSORS1C1Q9UIG5 152 aa15.26■□□□□ 0.03
ZNF558-204ENST00000596172 ANKRD61A6NGH8 418 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 SRRM5B3KS81 715 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 ATP6V1G2O95670 118 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 CCDC159P0C7I6 412 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 RPS2P15880 293 aaKnown RBP15.25■□□□□ 0.03
ZNF558-204ENST00000596172 MYL12AP19105 171 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 ZFP36P26651 326 aaKnown RBP15.25■□□□□ 0.03
ZNF558-204ENST00000596172 ST3GAL4Q11206 333 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 CCDC58Q4VC31 144 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 ESCO2Q56NI9 601 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 NLRC3Q7RTR2 1065 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 DEFB108BQ8NET1 73 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 PP6455Q8WZ26 134 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 C12orf43Q96C57 262 aaKnown RBP15.25■□□□□ 0.03
ZNF558-204ENST00000596172 BEX2Q9BXY8 128 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 METTL17Q9H7H0 456 aaPredicted RBP15.25■□□□□ 0.03
ZNF558-204ENST00000596172 PLEKHA1Q9HB21 404 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 HHLA2Q9UM44 414 aa15.25■□□□□ 0.03
ZNF558-204ENST00000596172 A0A0G2JMP0 313 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 A0A0X1KG70 313 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 PQLC2LA1A4F0 135 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 TMEM212A6NML5 194 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 E9PI62 339 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 C3orf80F5H4A9 247 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.24■□□□□ 0.03
ZNF558-204ENST00000596172 J3QLI3 93 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 GATBO75879 557 aaKnown RBP15.24■□□□□ 0.03
ZNF558-204ENST00000596172 SERPINA3P01011 423 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 HNF1AP20823 631 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 CD80P33681 288 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 HSPA13P48723 471 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 HOXA4Q00056 320 aaPredicted RBP15.24■□□□□ 0.03
ZNF558-204ENST00000596172 MICBQ29980 383 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 SFRP4Q6FHJ7 346 aaPredicted RBP15.24■□□□□ 0.03
ZNF558-204ENST00000596172 ZNF771Q7L3S4 317 aaPredicted RBP15.24■□□□□ 0.03
ZNF558-204ENST00000596172 FAM90A1Q86YD7 464 aa15.24■□□□□ 0.03
ZNF558-204ENST00000596172 ZNF573Q86YE8 665 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms