RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 MBOAT4Q96T53 435 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 C9orf16Q9BUW7 83 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 KAAG1Q9UBP8 84 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 ENPP5Q9UJA9 477 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 NUP50Q9UKX7 468 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 SNX5Q9Y5X3 404 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 OR5B21A6NL26 309 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 ATP6V1E1P36543 226 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 SNRPGP62308 76 aaKnown RBP12.54□□□□□ -0.4
TRIM28-205ENST00000595028 GNG3P63215 75 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 TUSC1Q2TAM9 212 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 CEACAM21Q3KPI0 293 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 WDR38Q5JTN6 314 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 SLC25A30Q5SVS4 291 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 ZNF684Q5T5D7 378 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 PLCXD3Q63HM9 321 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 ZFAND2BQ8WV99 257 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 C22orf15Q8WYQ4 148 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 UBE2FQ969M7 185 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 JMJD8Q96S16 334 aa12.54□□□□□ -0.4
TRIM28-205ENST00000595028 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 A0A1B0GTI1 187 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 A0A1B0GW55 424 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 METTL15A6NJ78 407 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 P2RY10O00398 339 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DVL1O14640 695 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 TMPRSS2O15393 492 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 ENTPD6O75354 484 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 FCN3O75636 299 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 SULT1C4O75897 302 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 RPP14O95059 124 aaKnown RBP12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4L2P0CJ85 424 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4L3P0CJ86 424 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4L4P0CJ87 422 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4L5P0CJ88 424 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4L6P0CJ89 424 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4L7P0CJ90 424 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 IGHV4-38-2P0DP08 117 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 CCL1P22362 96 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 FPR2P25090 351 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 MTNR1AP48039 350 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 ELF3P78545 371 aaPredicted RBP12.53□□□□□ -0.4
TRIM28-205ENST00000595028 ZNF85Q03923 595 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 MEDAGQ5VYS4 303 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 CD276Q5ZPR3 534 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 TMEM42Q69YG0 159 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 STUMQ69YW2 141 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4L9Q6RFH8 374 aaPredicted RBP12.53□□□□□ -0.4
TRIM28-205ENST00000595028 FAM220AQ7Z4H9 259 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 CATSPERDQ86XM0 798 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
TRIM28-205ENST00000595028 SEH1LQ96EE3 360 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 WDR13Q9H1Z4 485 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 OR51I2Q9H344 312 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DUX4Q9UBX2 424 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 ZNF69Q9UC07 566 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 SLC22A13Q9Y226 551 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 V9GYS6 101 aa12.53□□□□□ -0.4
TRIM28-205ENST00000595028 DHRS7CA6NNS2 312 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF732B4DXR9 585 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 AKR7A2O43488 359 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 GMFBP60983 142 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 FGF12P61328 243 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 ISL1P61371 349 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 ACTC1P68032 377 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 ACTA1P68133 377 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 OCLNQ16625 522 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 C11orf91Q3C1V1 193 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 DMRTC1Q5HYR2 192 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 CLVS2Q5SYC1 327 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 Q6ZSR3 168 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 MOB3CQ70IA8 216 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 DOK3Q7L591 496 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 SLC36A1Q7Z2H8 476 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 OR5A2Q8NGI9 324 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 OR14K1Q8NGZ2 314 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 ST8SIA4Q92187 359 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 RORBQ92753 470 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 CCL13Q99616 98 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 SLC29A1Q99808 456 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 ACOXLQ9NUZ1 547 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.52□□□□□ -0.41
TRIM28-205ENST00000595028 DNAJB11Q9UBS4 358 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 GMPPBQ9Y5P6 360 aa12.52□□□□□ -0.41
TRIM28-205ENST00000595028 NKX6-3A6NJ46 265 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 ZNF879B4DU55 563 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 J3QRE1 110 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 RHBDL1O75783 438 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 ECDO95905 644 aaPredicted RBP12.51□□□□□ -0.41
TRIM28-205ENST00000595028 PLATP00750 562 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 NRASP01111 189 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 GABRB1P18505 474 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 AMY2BP19961 511 aa12.51□□□□□ -0.41
TRIM28-205ENST00000595028 TP53I3Q53FA7 332 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms