RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SLC6A9P48067 706 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 ZNF41P51814 821 aaPredicted RBP13.59□□□□□ -0.23
PNKP-204ENST00000594661 RPL27P61353 136 aaKnown RBP13.59□□□□□ -0.23
PNKP-204ENST00000594661 USF2Q15853 346 aaPredicted RBP13.59□□□□□ -0.23
PNKP-204ENST00000594661 RNASE10Q5GAN6 216 aaKnown RBP13.59□□□□□ -0.23
PNKP-204ENST00000594661 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 BTNL8Q6UX41 500 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 HEPN1Q6WQI6 88 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 DPY19L4Q7Z388 723 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 SELENOIQ9C0D9 397 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 DOK5Q9P104 306 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 FLVCR1Q9Y5Y0 555 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 V9GY05 133 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 PCSK5Q92824 1860 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 A0A087WV48 116 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 TRBV6-7A0A0A0MS04 114 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 TP53I11O14683 189 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 UPK3AO75631 287 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 MT-CO3P00414 261 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 IGHEP01854 428 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 EDN3P14138 238 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 FOXK1P85037 733 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 RHEBQ15382 184 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 PRSS35Q8N3Z0 413 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 OR4K17Q8NGC6 315 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 RGP1Q92546 391 aaPredicted RBP13.58□□□□□ -0.23
PNKP-204ENST00000594661 NOL4LQ96MY1 436 aaPredicted RBP13.58□□□□□ -0.23
PNKP-204ENST00000594661 SLC25A21Q9BQT8 299 aaPredicted RBP13.58□□□□□ -0.23
PNKP-204ENST00000594661 SUCNR1Q9BXA5 334 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 SLC25A18Q9H1K4 315 aa13.58□□□□□ -0.23
PNKP-204ENST00000594661 PRSS37A4D1T9 235 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 H3BML4 177 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 H7C1Q1 480 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 ZNF208O43345 1280 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 ABHD16AO95870 558 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 GTF2F2P13984 249 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 PGAM2P15259 253 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 SULT1A1P50225 295 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 NDUFA6P56556 154 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 CLDN12P56749 244 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 SSBP1Q04837 148 aaKnown RBP13.58□□□□□ -0.24
PNKP-204ENST00000594661 Q0VFX4 171 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 DHRS2Q13268 280 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 HNF4GQ14541 408 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 SLC25A53Q5H9E4 307 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 THEM4Q5T1C6 240 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 OPN5Q6U736 354 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 KDM8Q8N371 416 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 GALNT16Q8N428 558 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 ZNF519Q8TB69 540 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 FOXN4Q96NZ1 517 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 CDC6Q99741 560 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 TXNIPQ9H3M7 391 aa13.58□□□□□ -0.24
PNKP-204ENST00000594661 ELOA3CA0A087WX78 387 aaPredicted RBP13.57□□□□□ -0.24
PNKP-204ENST00000594661 CCL3P10147 92 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 HLA-DOBP13765 273 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 ALOX5APP20292 161 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 SSR4P51571 173 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 MLF1P58340 268 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 RPS19BP1Q86WX3 136 aaKnown RBP13.57□□□□□ -0.24
PNKP-204ENST00000594661 FADS6Q8N9I5 356 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 OR1J2Q8NGS2 313 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 OR5AK2Q8NH90 309 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 GALNT14Q96FL9 552 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 SEC22AQ96IW7 307 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 MRGPRX4Q96LA9 322 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 GPR61Q9BZJ8 451 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 ATG5Q9H1Y0 275 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 FRRS1LQ9P0K9 344 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 B9D1Q9UPM9 204 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 FARSAQ9Y285 508 aaKnown RBP13.57□□□□□ -0.24
PNKP-204ENST00000594661 TMED3Q9Y3Q3 217 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 TMEM14AQ9Y6G1 99 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 CCDC187A0A096LP49 1063 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 SFTPBP07988 381 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 G0S2P27469 103 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 LPAR6P43657 344 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 RAB1AP62820 205 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 EGR3Q06889 387 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 COTL1Q14019 142 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 ACTBL2Q562R1 376 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 HIST2H3AQ71DI3 136 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 HIST3H2BBQ8N257 126 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 ZNF433Q8N7K0 673 aaPredicted RBP13.57□□□□□ -0.24
PNKP-204ENST00000594661 CLEC1AQ8NC01 280 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 MFSD8Q8NHS3 518 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 DDIT4LQ96D03 193 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 OPN3Q9H1Y3 402 aaPredicted RBP13.57□□□□□ -0.24
PNKP-204ENST00000594661 SIRT7Q9NRC8 400 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 KCNG2Q9UJ96 466 aa13.57□□□□□ -0.24
PNKP-204ENST00000594661 A0A1B0GTH9 108 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 ZNF726A6NNF4 738 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 MS4A18H0YCH9 400 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 CCSO14618 274 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 SLC16A7O60669 478 aa13.56□□□□□ -0.24
PNKP-204ENST00000594661 TMIGD3P0DMS9 266 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms