RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 UFD1Q92890 307 aa13.77□□□□□ -0.21
SYMPK-204ENST00000593959 ADGRL4Q9HBW9 690 aa13.77□□□□□ -0.21
SYMPK-204ENST00000593959 NUP50Q9UKX7 468 aa13.77□□□□□ -0.21
SYMPK-204ENST00000593959 LSM2Q9Y333 95 aaKnown RBP13.77□□□□□ -0.21
SYMPK-204ENST00000593959 C5orf63A6NC05 138 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 TVP23AA6NH52 213 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 H3BMQ9 156 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 AIREO43918 545 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 GMDSO60547 372 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 RGS9O75916 674 aaPredicted RBP13.76□□□□□ -0.21
SYMPK-204ENST00000593959 LIMS3P0CW19 117 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 LIMS4P0CW20 117 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 RPS27P42677 84 aaKnown RBP13.76□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF92Q03936 586 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 MRPL28Q13084 256 aaKnown RBP13.76□□□□□ -0.21
SYMPK-204ENST00000593959 LINC01590Q5TEZ4 76 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 C12orf54Q6X4T0 127 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 C9orf139Q6ZV77 190 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 SLC16A9Q7RTY1 509 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 DCXRQ7Z4W1 244 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 LHFPL3Q86UP9 236 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 SPSB4Q96A44 273 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 OR5M11Q96RB7 305 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 ALG8Q9BVK2 526 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 SSBP3Q9BWW4 388 aaPredicted RBP13.76□□□□□ -0.21
SYMPK-204ENST00000593959 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 TRIM36Q9NQ86 728 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 BABAM2Q9NXR7 383 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 MRPL15Q9P015 296 aaKnown RBP13.76□□□□□ -0.21
SYMPK-204ENST00000593959 OR5V1Q9UGF6 321 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 CLEC2DQ9UHP7 191 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 NOP16Q9Y3C1 178 aaKnown RBP13.76□□□□□ -0.21
SYMPK-204ENST00000593959 PPIAL4AQ9Y536 164 aa13.76□□□□□ -0.21
SYMPK-204ENST00000593959 KIR2DS1A0A191URI9 304 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF670-ZNF695F2Z2N8 137 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 HAX1O00165 279 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 TNFRSF13BO14836 293 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-204ENST00000593959 RPS2P15880 293 aaKnown RBP13.75□□□□□ -0.21
SYMPK-204ENST00000593959 CPEP16870 476 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 PSMB10P40306 273 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 ENTPD1P49961 510 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 PRSS12P56730 875 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 UBA52P62987 128 aaKnown RBP13.75□□□□□ -0.21
SYMPK-204ENST00000593959 TPBGQ13641 420 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 TRAM1Q15629 374 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF322Q6U7Q0 402 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF841Q6ZN19 808 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 DCDC5Q6ZRR9 648 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 RHOUQ7L0Q8 258 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 SLC35F2Q8IXU6 374 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 SYS1Q8N2H4 156 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF511Q8NB15 262 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 OR51L1Q8NGJ5 315 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 SPRYD4Q8WW59 207 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-204ENST00000593959 RAB40AQ8WXH6 277 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 UPRTQ96BW1 309 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 NEIL1Q96FI4 390 aaPredicted RBP13.75□□□□□ -0.21
SYMPK-204ENST00000593959 KCNJ15Q99712 375 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 MARCH7Q9H992 704 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF69Q9UC07 566 aa13.75□□□□□ -0.21
SYMPK-204ENST00000593959 IGHV2-70DA0A0C4DH43 119 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 IGHV3-64DA0A0J9YX35 117 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF593O00488 134 aaPredicted RBP13.74□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF205O95201 554 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 APOL3O95236 402 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 GYPBP06028 91 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 CLUP10909 449 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 CA6P23280 308 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 SERPINB10P48595 397 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 MPPED2Q15777 294 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 FAM201AQ5SY85 155 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 GLYATL3Q5SZD4 288 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 LRRN1Q6UXK5 716 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 PLEKHG7Q6ZR37 379 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 SHFQ7M4L6 423 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 MRPL21Q7Z2W9 205 aaKnown RBP13.74□□□□□ -0.21
SYMPK-204ENST00000593959 GATAD2BQ8WXI9 593 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 ASB17Q8WXJ9 295 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 C22orf15Q8WYQ4 148 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 GCDHQ92947 438 aaPredicted RBP13.74□□□□□ -0.21
SYMPK-204ENST00000593959 SLAMF6Q96DU3 332 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 ZMYND19Q96E35 227 aaPredicted RBP13.74□□□□□ -0.21
SYMPK-204ENST00000593959 OPALINQ96PE5 141 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 MRI1Q9BV20 369 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 OPA3Q9H6K4 179 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 NDUFB11Q9NX14 153 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 SSR3Q9UNL2 185 aa13.74□□□□□ -0.21
SYMPK-204ENST00000593959 PLATP00750 562 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 GALP22466 123 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 TGFBR2P37173 567 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 GBX2P52951 348 aaPredicted RBP13.73□□□□□ -0.21
SYMPK-204ENST00000593959 ACTG1P63261 375 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 CTF1Q16619 201 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 PRSS45Q7RTY3 260 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 SIGLECL1Q8N7X8 197 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 ZNF454Q8N9F8 522 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 SPERTQ8NA61 448 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 OR11L1Q8NGX0 322 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 OR2AE1Q8NHA4 323 aa13.73□□□□□ -0.21
SYMPK-204ENST00000593959 RNF133Q8WVZ7 376 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms