RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ASCC1Q8N9N2 400 aaKnown RBP11.44□□□□□ -0.58
VRK3-205ENST00000593919 WDR31Q8NA23 367 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 OR11H7Q8NGC8 314 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 OR14K1Q8NGZ2 314 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 C15orf40Q8WUR7 153 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 REEP6Q96HR9 211 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 GAL3ST1Q99999 423 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 ATG5Q9H1Y0 275 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 OR10A4Q9H209 315 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 ZNF629Q9UEG4 869 aaPredicted RBP11.44□□□□□ -0.58
VRK3-205ENST00000593919 ZFYVE26Q68DK2 2539 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 TRAV18A0A075B6X5 111 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 TRGV8A0A0C4DH27 118 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 NAP1L6A6NFF2 107 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 HTR2CP28335 458 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
VRK3-205ENST00000593919 GZMKP49863 264 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 IDH3GP51553 393 aaPredicted RBP11.43□□□□□ -0.58
VRK3-205ENST00000593919 ST3GAL2Q16842 350 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 GLYATL3Q5SZD4 288 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 PAQR4Q8N4S7 273 aaPredicted RBP11.43□□□□□ -0.58
VRK3-205ENST00000593919 JAGN1Q8N5M9 183 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 SLC30A7Q8NEW0 376 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 OR56B4Q8NH76 319 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 DMRTA2Q96SC8 542 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 VKORC1Q9BQB6 163 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 DIABLOQ9NR28 239 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 MEIS3P1A6NDR6 274 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 A8MXE2 369 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 ZNF20P17024 532 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 PRSS12P56730 875 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 GUCA2AQ02747 115 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 Q5BKY6 102 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 OLFML2AQ68BL7 652 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 FAM166AQ6J272 317 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 Q6ZSR3 168 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 RELL2Q8NC24 303 aaPredicted RBP11.43□□□□□ -0.58
VRK3-205ENST00000593919 SLC25A28Q96A46 364 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 MYEF2Q9P2K5 600 aaKnown RBP11.43□□□□□ -0.58
VRK3-205ENST00000593919 MEMO1Q9Y316 297 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 V9GYS6 101 aa11.43□□□□□ -0.58
VRK3-205ENST00000593919 OR5H1A6NKK0 313 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 ARPC1BO15143 372 aaKnown RBP11.42□□□□□ -0.58
VRK3-205ENST00000593919 MTRF1O75570 445 aaKnown RBP11.42□□□□□ -0.58
VRK3-205ENST00000593919 AGFG2O95081 481 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 ALDOBP05062 364 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 FCER2P06734 321 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 PSMB1P20618 241 aaKnown RBP11.42□□□□□ -0.58
VRK3-205ENST00000593919 IL32P24001 234 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 WNT5AP41221 380 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 CA7P43166 264 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 VEGFCP49767 419 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 CASP6P55212 293 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 RAG2P55895 527 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 ZNF92Q03936 586 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 PCGF3Q3KNV8 242 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 CD276Q5ZPR3 534 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 MRGPRGQ86SM5 289 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 LIX1LQ8IVB5 337 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 ZNF101Q8IZC7 436 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 OR5D14Q8NGL3 314 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 OR13C9Q8NGT0 318 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 ZFAND1Q8TCF1 268 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 C1QTNF6Q9BXI9 259 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 ACTR6Q9GZN1 396 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 ZNF391Q9UJN7 358 aa11.42□□□□□ -0.58
VRK3-205ENST00000593919 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 FABP7O15540 132 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 XRCC2O43543 280 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 SSNA1O43805 119 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 RBBP9O75884 186 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 CBR1P16152 277 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 FAHP16930 419 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 CXCL3P19876 107 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 ACKR3P25106 362 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 TNK1Q13470 666 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 TBC1D28Q2M2D7 210 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 ZNF529Q6P280 563 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 OR6M1Q8NGM8 313 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 RND1Q92730 232 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 APOBEC3DQ96AK3 386 aaPredicted RBP11.41□□□□□ -0.58
VRK3-205ENST00000593919 S100PBPQ96BU1 408 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 RGCCQ9H4X1 137 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 OBP2BQ9NPH6 170 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 PIGLQ9Y2B2 252 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 hCG_38984A0A1B0GV85 526 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 MEGF11A6BM72 1044 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 A6NJY4 79 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 H7C417 338 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 TPPPO94811 219 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 NGFP01138 241 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 HPXP02790 462 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 FAM3AP98173 230 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 FAM27E3Q08E93 113 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 TMEM211Q6ICI0 200 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 DNM1P46Q6ZS02 220 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 OR1M1Q8NGA1 313 aa11.41□□□□□ -0.58
VRK3-205ENST00000593919 SPSB4Q96A44 273 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms