RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 SAA4P35542 130 aa19.58■□□□□ 0.72
LSM4-202ENST00000593564 UBE2E1P51965 193 aa19.58■□□□□ 0.72
LSM4-202ENST00000593564 CAV3P56539 151 aa19.58■□□□□ 0.72
LSM4-202ENST00000593564 ACSM1Q08AH1 577 aa19.58■□□□□ 0.72
LSM4-202ENST00000593564 TRIM25Q14258 630 aaKnown RBP19.58■□□□□ 0.72
LSM4-202ENST00000593564 KCTD8Q6ZWB6 473 aa19.58■□□□□ 0.72
LSM4-202ENST00000593564 ZDHHC23Q8IYP9 409 aa19.58■□□□□ 0.72
LSM4-202ENST00000593564 RNF170Q96K19 258 aa19.58■□□□□ 0.72
LSM4-202ENST00000593564 METTL8Q9H825 291 aaKnown RBP19.58■□□□□ 0.72
LSM4-202ENST00000593564 ZNF816-ZNF321PA0A0X1KG74 233 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 MEIOCA2RUB1 952 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 ARRDC5A6NEK1 342 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 B2RBV5 119 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 SELENOFO60613 162 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 ACAA1P09110 424 aaPredicted RBP19.57■□□□□ 0.72
LSM4-202ENST00000593564 PSMA6P60900 246 aaKnown RBP19.57■□□□□ 0.72
LSM4-202ENST00000593564 PNKDQ8N490 385 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 GIPC3Q8TF64 312 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 THEM6Q8WUY1 208 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 PIGCQ92535 297 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 NLKQ9UBE8 527 aa19.57■□□□□ 0.72
LSM4-202ENST00000593564 PRR23D1E9PI22 279 aaPredicted RBP19.56■□□□□ 0.72
LSM4-202ENST00000593564 TFF1P04155 84 aa19.56■□□□□ 0.72
LSM4-202ENST00000593564 PRR23D2P0DMB1 279 aaPredicted RBP19.56■□□□□ 0.72
LSM4-202ENST00000593564 MS4A2Q01362 244 aa19.56■□□□□ 0.72
LSM4-202ENST00000593564 C2orf68Q2NKX9 166 aa19.56■□□□□ 0.72
LSM4-202ENST00000593564 PLBD1Q6P4A8 553 aa19.56■□□□□ 0.72
LSM4-202ENST00000593564 KRT74Q7RTS7 529 aa19.56■□□□□ 0.72
LSM4-202ENST00000593564 OR8B12Q8NGG6 310 aa19.56■□□□□ 0.72
LSM4-202ENST00000593564 NIPAL2Q9H841 368 aa19.56■□□□□ 0.72
LSM4-202ENST00000593564 A0A1W2PQ09 198 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 OR2AT4A6NND4 320 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 RAP2AP10114 183 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 NDUFB7P17568 137 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 GNGT1P63211 74 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 EGR3Q06889 387 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 BLMHQ13867 455 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 PAPD5Q8NDF8 572 aaKnown RBP19.55■□□□□ 0.72
LSM4-202ENST00000593564 BEND2Q8NDZ0 799 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 HIST1H2AAQ96QV6 131 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 KLHDC2Q9Y2U9 406 aa19.55■□□□□ 0.72
LSM4-202ENST00000593564 ANKRD61A6NGH8 418 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 PRODHO43272 600 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 GLRA1P23415 457 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 GPM6AP51674 278 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 GINS1Q14691 196 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 DUS3LQ96G46 650 aaKnown RBP19.54■□□□□ 0.72
LSM4-202ENST00000593564 PPA2Q9H2U2 334 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 OR51I2Q9H344 312 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 FBLN5Q9UBX5 448 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 LRP12Q9Y561 859 aa19.54■□□□□ 0.72
LSM4-202ENST00000593564 IGKV1D-17A0A075B6S4 117 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 TRBV23-1A0A0A0MS06 115 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 RHBDL1O75783 438 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 HMGN1P05114 100 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 POU1F1P28069 291 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 GNG3P63215 75 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 SLC35E4Q6ICL7 350 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 OR5D13Q8NGL4 314 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 FAM110DQ8TAY7 271 aaPredicted RBP19.53■□□□□ 0.72
LSM4-202ENST00000593564 FAM81AQ8TBF8 368 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 ITFG2Q969R8 447 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 CHID1Q9BWS9 393 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 ZNF222Q9UK12 451 aa19.53■□□□□ 0.72
LSM4-202ENST00000593564 SF3B6Q9Y3B4 125 aaKnown RBP19.53■□□□□ 0.72
LSM4-202ENST00000593564 CST1P01037 141 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 PSG2P11465 335 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 ALOX5APP20292 161 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 MAP2K3P46734 347 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 GABRA2P47869 451 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 CEACAM21Q3KPI0 293 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 SLC35D3Q5M8T2 416 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 HCP5Q6MZN7 132 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 CPOQ8IVL8 374 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 ASB9Q96DX5 294 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 NSL1Q96IY1 281 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 ELL3Q9HB65 397 aaPredicted RBP19.52■□□□□ 0.72
LSM4-202ENST00000593564 MAB21L2Q9Y586 359 aa19.52■□□□□ 0.72
LSM4-202ENST00000593564 A0A0U1RQV5 110 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 ACOD1A6NK06 481 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 ZNF732B4DXR9 585 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 GABRA5P31644 462 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 GYS2P54840 703 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 KRT77Q7Z794 578 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 ZNRF1Q8ND25 227 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 SDSLQ96GA7 329 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 LRGUKQ96M69 825 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 TAS2R1Q9NYW7 299 aa19.51■□□□□ 0.71
LSM4-202ENST00000593564 H0YAE9 185 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 H3BUX3 64 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 CSF1P09603 554 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 OSMP13725 252 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 SLC2A5P22732 501 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 CDK5Q00535 292 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 CEP78Q5JTW2 689 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 TRPM8Q7Z2W7 1104 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 TMEM179BQ7Z7N9 219 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 C1QL4Q86Z23 238 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 ADGRG5Q8IZF4 528 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 TMEM185AQ8NFB2 350 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms