RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 MEDAGQ5VYS4 303 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 FAM45BPQ6NSW5 357 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 MBOAT1Q6ZNC8 495 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 MRPL52Q86TS9 123 aaKnown RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ITIH5Q86UX2 942 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 PHF13Q86YI8 300 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CLVS1Q8IUQ0 354 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 BBS7Q8IWZ6 715 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 PUSL1Q8N0Z8 303 aaKnown RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 PDIK1LQ8N165 341 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 MTURNQ8N3F0 131 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 PXT1Q8NFP0 134 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 VN1R2Q8NFZ6 395 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 OR5L2Q8NGL0 311 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 OR9A4Q8NGU2 314 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 OR10J5Q8NHC4 309 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 RHOXF1Q8NHV9 184 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 FAM45AQ8TCE6 357 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 RNASEH2CQ8TDP1 164 aaKnown RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 AENQ8WTP8 325 aaKnown RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ZBED6CLQ96FA7 236 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 PCED1BQ96HM7 432 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 SERPINB12Q96P63 405 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CALN1Q9BXU9 219 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 BEX2Q9BXY8 128 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 NEUROG2Q9H2A3 272 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ALG9Q9H6U8 611 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 MYOZ1Q9NP98 299 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 FBXO8Q9NRD0 319 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CTPS2Q9NRF8 586 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 NLE1Q9NVX2 485 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CLN6Q9NWW5 311 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 B4GALT7Q9UBV7 327 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 SMPXQ9UHP9 88 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 FBXO7Q9Y3I1 522 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 DOPEY2Q9Y3R5 2298 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 FLNCQ14315 2725 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 GON4LQ3T8J9 2241 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ABCB11O95342 1321 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.79□□□□□ -1.8
SMAD4-216ENST00000593223 A0A1B0GV72 72 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 LRIT2A6NDA9 550 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 SLC9A3R1O14745 358 aaPredicted RBP3.79□□□□□ -1.8
SMAD4-216ENST00000593223 EFNA2O43921 213 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 KIAA0513O60268 411 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 UGT1A9O60656 530 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 DUSP11O75319 330 aaKnown RBP3.79□□□□□ -1.8
SMAD4-216ENST00000593223 CD160O95971 181 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 RENP00797 406 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 GUSBP08236 651 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 CELP19835 753 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 BCL3P20749 454 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 LEPP41159 167 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 BDKRB1P46663 353 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 P2RY4P51582 365 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 CAV2P51636 162 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 TAS2R60P59551 318 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 UBE2MP61081 183 aaKnown RBP3.79□□□□□ -1.8
SMAD4-216ENST00000593223 FAM3AP98173 230 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 TFAMQ00059 246 aaKnown RBP3.79□□□□□ -1.8
SMAD4-216ENST00000593223 RGS1Q08116 209 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 KRR1Q13601 381 aaKnown RBP3.79□□□□□ -1.8
SMAD4-216ENST00000593223 POU6F1Q14863 301 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 GABRA6Q16445 453 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 SOHLH1Q5JUK2 328 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ZNF506Q5JVG8 444 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 TRIQKQ629K1 86 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 FRMPD2BQ6IN97 320 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 NIPAL1Q6NVV3 410 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ZNF544Q6NX49 715 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 STEAP1BQ6NZ63 245 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 BTNL3Q6UXE8 466 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 LYG2Q86SG7 212 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ZNF547Q8IVP9 402 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 RIMKLAQ8IXN7 391 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 PRSS58Q8IYP2 241 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 MS4A15Q8N5U1 240 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 TPRX1Q8N7U7 411 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 C15orf54Q8N8G6 183 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 OR4K2Q8NGD2 314 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 OR5L1Q8NGL2 311 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ITFG1Q8TB96 612 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ACTRT1Q8TDG2 376 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 BLOC1S5Q8TDH9 187 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ART4Q93070 314 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 BORCS5Q969J3 196 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 C1orf147Q96MC9 270 aaPredicted RBP3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ABCB9Q9NP78 766 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ARMC1Q9NVT9 282 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 DHRS7Q9Y394 339 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 NEUROG3Q9Y4Z2 214 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ITPR2Q14571 2701 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 LRBAP50851 2863 aa3.79□□□□□ -1.8
SMAD4-216ENST00000593223 ROBO3Q96MS0 1386 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 GLYATL1P3A0A0U1RQE8 302 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 RNF212BA8MTL3 300 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 SEC14L6B5MCN3 397 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 M0QZK8 103 aa3.78□□□□□ -1.8
SMAD4-216ENST00000593223 DFFAO00273 331 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms