RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 PTP4A1Q93096 173 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 GPR137Q96N19 417 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 OR2M2Q96R28 347 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ZNF471Q9BX82 626 aaPredicted RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 MS4A5Q9H3V2 200 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 LIN7BQ9HAP6 207 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ADGRL4Q9HBW9 690 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 DLL3Q9NYJ7 618 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 CYB5R1Q9UHQ9 305 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 PPIHO43447 177 aaKnown RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 PTP4A3O75365 173 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 DHRS3O75911 302 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 CELA3AP09093 270 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 CA6P23280 308 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 PTAFRP25105 342 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 LSM11P83369 360 aaKnown RBP eCLIP8.68□□□□□ -1.02
LIG3-216ENST00000593099 SGPP2Q8IWX5 399 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 OR6Q1Q8NGQ2 317 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 RAB1CQ92928 201 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 NICN1Q9BSH3 213 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 HAO2Q9NYQ3 351 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 CDC14BO60729 498 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 DNASE1P24855 282 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 NFYBP25208 207 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 ZNF616Q08AN1 781 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 CAMK2BQ13554 666 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 MDP1Q86V88 176 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 RDH5Q92781 318 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 GHRLQ9UBU3 117 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 C20orf202A1L168 122 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 SNAPINO95295 136 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 ALDOBP05062 364 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 IL11P20809 199 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 CCR9P51686 369 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 UBE2KP61086 200 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 RPL23AP62750 156 aaKnown RBP8.67□□□□□ -1.02
LIG3-216ENST00000593099 WDR38Q5JTN6 314 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 CXorf67Q86X51 503 aaPredicted RBP8.67□□□□□ -1.02
LIG3-216ENST00000593099 FAM185AQ8N0U4 392 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 NUDT15Q9NV35 164 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 NDUFB11Q9NX14 153 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 TAS2R5Q9NYW4 299 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 CEPT1Q9Y6K0 416 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 KIR2DS1A0A191URI9 304 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 BTBD17A6NE02 478 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 SIRPB1O00241 398 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 CTDSP2O14595 271 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
LIG3-216ENST00000593099 KIR2DS4P43632 304 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 ALDH3B2P48448 385 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 CATR1Q13166 79 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 KIR2DS1Q14954 304 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 GUK1Q16774 197 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 FAM27BQ5VT28 67 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 ZNF600Q6ZNG1 722 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 Q8IYB0 196 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 OR13C5Q8NGS8 318 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 PELI1Q96FA3 418 aa8.67□□□□□ -1.02
LIG3-216ENST00000593099 THAP7Q9BT49 309 aaPredicted RBP8.67□□□□□ -1.02
LIG3-216ENST00000593099 NAA50Q9GZZ1 169 aaKnown RBP8.67□□□□□ -1.02
LIG3-216ENST00000593099 MRPS18CQ9Y3D5 142 aaKnown RBP8.67□□□□□ -1.02
LIG3-216ENST00000593099 A0A0G2JMM0 328 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 A0A1W2PPB8 328 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 A0A1W2PRS3 328 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 KIR3DP1A8MWS1 328 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 GABARAPO95166 117 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 GPM6AP51674 278 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 SPCS2Q15005 226 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 MICBQ29980 383 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 SLC25A35Q3KQZ1 300 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 FAM209BQ5JX69 171 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 RIPPLY2Q5TAB7 128 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 CCBE1Q6UXH8 406 aaPredicted RBP8.66□□□□□ -1.02
LIG3-216ENST00000593099 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 ZFAND1Q8TCF1 268 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 CCL17Q92583 94 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 PIMREGQ9BSJ6 248 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 MPC1Q9Y5U8 109 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 RALGAPA1Q6GYQ0 2036 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 NDUFB3O43676 98 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 IGF2P01344 180 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 CLEC2LP0C7M8 214 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 CALCBP10092 127 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 TNFSF8P32971 234 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 SOX18P35713 384 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 TAS2R31P59538 309 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 GNMTQ14749 295 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 BEX5Q5H9J7 111 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 LYPD4Q6UWN0 246 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 SVBPQ8N300 66 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 TXN2Q99757 166 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 MYOZ1Q9NP98 299 aaPredicted RBP8.66□□□□□ -1.02
LIG3-216ENST00000593099 PRSS50Q9UI38 385 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 CHST2Q9Y4C5 530 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 MEIKINA0A087WXM9 373 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 CD300LBA8K4G0 201 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 CIDEAO60543 219 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 PRDX4Q13162 271 aa8.66□□□□□ -1.02
LIG3-216ENST00000593099 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms