RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-241	ENST00000593048	RSL24D1	Q9UHA3	163 aa	Known RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	SOX21	Q9Y651	276 aa	Predicted RBP	13.44	□□□□□ -0.26
CIRBP-241	ENST00000593048	OOEP	A6NGQ2	149 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	C22orf46	C9J442	243 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	XPNPEP2	O43895	674 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	NOL3	O60936	208 aa	Known RBP	13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	PTBP3	O95758	552 aa	Known RBP	13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	GYPA	P02724	150 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	HTR1A	P08908	422 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	ANOS1	P23352	680 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	DCK	P27707	260 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	GSTT1	P30711	240 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	EMX1	Q04741	257 aa	Predicted RBP	13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	RAB40B	Q12829	278 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	NXNL2	Q5VZ03	156 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	SHISA2	Q6UWI4	295 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	BRD3OS	Q6XYD6	125 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	ZNF826P	Q6ZT77	177 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	DPY19L4	Q7Z388	723 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	GID4	Q8IVV7	300 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	STX19	Q8N4C7	294 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	GGH	Q92820	318 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	REEP6	Q96HR9	211 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	MED20	Q9H944	212 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	DNAJC27	Q9NZQ0	273 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	CEPT1	Q9Y6K0	416 aa		13.43	□□□□□ -0.26
CIRBP-241	ENST00000593048	FAM183A	A6NL82	134 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	CLDN34	H7C241	214 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	LIPF	P07098	398 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	PAICS	P22234	425 aa	Known RBP	13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	BPIFB3	P59826	476 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	IL13RA1	P78552	427 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	GFOD2	Q3B7J2	385 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	TMEM236	Q5W0B7	351 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	FAM57B	Q71RH2	274 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	SHF	Q7M4L6	423 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	SLC16A9	Q7RTY1	509 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	IQCF1	Q8N6M8	205 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	TCEANC	Q8N8B7	351 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	PNLDC1	Q8NA58	520 aa	Known RBP	13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	RAB2B	Q8WUD1	216 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	SPSB4	Q96A44	273 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	MYCBP	Q99417	103 aa	Predicted RBP	13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	ABHD6	Q9BV23	337 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	CCDC90B	Q9GZT6	254 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	OR51V1	Q9H2C8	321 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	MARCH7	Q9H992	704 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	UNKL	Q9H9P5	680 aa	Known RBP	13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	BRD7	Q9NPI1	651 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	ACOT13	Q9NPJ3	140 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	PTTG2	Q9NZH5	202 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	CTSZ	Q9UBR2	303 aa		13.42	□□□□□ -0.26
CIRBP-241	ENST00000593048	MDFIC2	A0A1B0GVS7	189 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	ZNF879	B4DU55	563 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	HOXA3	O43365	443 aa	Predicted RBP	13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	TOX4	O94842	621 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	GLCE	O94923	617 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	H2BFM	P0C1H6	154 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	CFL1	P23528	166 aa	Known RBP	13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	GNAL	P38405	381 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	FAM3A	P98173	230 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	ST3GAL4	Q11206	333 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	POU4F2	Q12837	409 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	IRF3	Q14653	427 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	DEFB112	Q30KQ8	113 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	LINC01590	Q5TEZ4	76 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	METTL11B	Q5VVY1	283 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	FOXB2	Q5VYV0	432 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	C16orf87	Q6PH81	154 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	AHSA2	Q719I0	299 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	EGFL6	Q8IUX8	553 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	OR52H1	Q8NGJ2	320 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	UBE2F	Q969M7	185 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	SGK3	Q96BR1	496 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	TMEM80	Q96HE8	168 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	PGAM5	Q96HS1	289 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	IL4I1	Q96RQ9	567 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	JAM3	Q9BX67	310 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	OR10A2	Q9H208	303 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	FGF20	Q9NP95	211 aa	Predicted RBP	13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	TNFRSF19	Q9NS68	423 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	MGAM2	Q2M2H8	2515 aa		13.41	□□□□□ -0.26
CIRBP-241	ENST00000593048	IGHV3OR15-7	A0A075B7D8	119 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	PRR23D1	E9PI22	279 aa	Predicted RBP	13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	P2RY10	O00398	339 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	TMPRSS2	O15393	492 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	PRKY	O43930	277 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	ENTPD6	O75354	484 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	FADS2	O95864	444 aa	Known RBP	13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	SFTPB	P07988	381 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	DBT	P11182	482 aa	Known RBP	13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	CFHR2	P36980	270 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	ZNF121	P58317	390 aa	Predicted RBP	13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	NEDD8	Q15843	81 aa		13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	SMN1	Q16637	294 aa	Known RBP	13.4	□□□□□ -0.26
CIRBP-241	ENST00000593048	MICB	Q29980	383 aa		13.4	□□□□□ -0.26

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