RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 OR12D2P58182 307 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 CDONQ4KMG0 1287 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 DOK3Q7L591 496 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 C1QL2Q7Z5L3 287 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 C11orf53Q8IXP5 236 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 PACRGLQ8N7B6 248 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 OR14K1Q8NGZ2 314 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 APH1BQ8WW43 257 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 C4orf36Q96KX1 117 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 ADI1Q9BV57 179 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 C7orf69Q9H7B7 122 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 RNPEPL1Q9HAU8 725 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 TRIM36Q9NQ86 728 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 C8orf4Q9NR00 106 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 EXOGQ9Y2C4 368 aaKnown RBP11.62□□□□□ -0.55
CLIP3-205ENST00000592017 PCDHGB1Q9Y5G3 927 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 V9GYS6 101 aa11.62□□□□□ -0.55
CLIP3-205ENST00000592017 NBEAL1Q6ZS30 2694 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 A0A1B0GTI1 187 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 A8MXK9 166 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 TRAPPC2LH3BP13 241 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 J3QRE1 110 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 FSTL3O95633 263 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 NRASP01111 189 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 FSHBP01225 129 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 EPHA1P21709 976 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 GATA3P23771 443 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 ISL1P61371 349 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 ACTA2P62736 377 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 GNG3P63215 75 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 ACTG2P63267 376 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 ELF3P78545 371 aaPredicted RBP11.61□□□□□ -0.55
CLIP3-205ENST00000592017 SMN1Q16637 294 aaKnown RBP11.61□□□□□ -0.55
CLIP3-205ENST00000592017 CEACAM21Q3KPI0 293 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 CLVS2Q5SYC1 327 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 ZBTB37Q5TC79 503 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 OGFRL1Q5TC84 451 aaPredicted RBP11.61□□□□□ -0.55
CLIP3-205ENST00000592017 ZNF691Q5VV52 312 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 LHFPL3Q86UP9 236 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 FAM90A1Q86YD7 464 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 PRSS35Q8N3Z0 413 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 DHRSXQ8N5I4 330 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.61□□□□□ -0.55
CLIP3-205ENST00000592017 SCCPDHQ8NBX0 429 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 CNIH3Q8TBE1 160 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 SEH1LQ96EE3 360 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 MRPL48Q96GC5 212 aaKnown RBP11.61□□□□□ -0.55
CLIP3-205ENST00000592017 ALG8Q9BVK2 526 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 TLNRD1Q9H1K6 362 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 CTSZQ9UBR2 303 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 CLN8Q9UBY8 286 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 MYRFQ9Y2G1 1151 aa11.61□□□□□ -0.55
CLIP3-205ENST00000592017 RPL36Q9Y3U8 105 aaKnown RBP11.61□□□□□ -0.55
CLIP3-205ENST00000592017 A0A0A6YYJ9 748 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 LOC107986453A0A1B0GWG9 222 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 AKR7A2O43488 359 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 FADS2O95864 444 aaKnown RBP11.6□□□□□ -0.55
CLIP3-205ENST00000592017 LHBP01229 141 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 HTR1AP08908 422 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 UBCP0CG48 685 aaKnown RBP11.6□□□□□ -0.55
CLIP3-205ENST00000592017 KIR3DL2P43630 455 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 RAB40BQ12829 278 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 GALEQ14376 348 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 MICBQ29980 383 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 TTC23Q5W5X9 447 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 RDH10Q8IZV5 341 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 TEX29Q8N6K0 151 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 SETD9Q8NE22 299 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 OR5A2Q8NGI9 324 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 OR52I1Q8NGK6 324 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 ITFG2Q969R8 447 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 MRI1Q9BV20 369 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 VCXQ9H320 206 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 ERVK-18Q9QC07 812 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 DNAJB11Q9UBS4 358 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 POLR3KQ9Y2Y1 108 aaPredicted RBP11.6□□□□□ -0.55
CLIP3-205ENST00000592017 WNK2Q9Y3S1 2297 aa11.6□□□□□ -0.55
CLIP3-205ENST00000592017 TENM1Q9UKZ4 2725 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 OR5B21A6NL26 309 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 CASQ2O14958 399 aaPredicted RBP11.59□□□□□ -0.55
CLIP3-205ENST00000592017 TMPRSS2O15393 492 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 WBP4O75554 376 aaKnown RBP11.59□□□□□ -0.55
CLIP3-205ENST00000592017 RHBDL1O75783 438 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 ZNF12P17014 697 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 CCL1P22362 96 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 CPT2P23786 658 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 WDR25Q64LD2 544 aaPredicted RBP11.59□□□□□ -0.55
CLIP3-205ENST00000592017 HAGHLQ6PII5 290 aaPredicted RBP11.59□□□□□ -0.55
CLIP3-205ENST00000592017 BTNL3Q6UXE8 466 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 KCTD20Q7Z5Y7 419 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 OR10Z1Q8NGY1 313 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 OR2G2Q8NGZ5 317 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 TRMT10AQ8TBZ6 339 aaKnown RBP11.59□□□□□ -0.55
CLIP3-205ENST00000592017 NPRL2Q8WTW4 380 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 PELI1Q96FA3 418 aa11.59□□□□□ -0.55
CLIP3-205ENST00000592017 MYCBPQ99417 103 aaPredicted RBP11.59□□□□□ -0.55
CLIP3-205ENST00000592017 WDR13Q9H1Z4 485 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms