RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622		Q96MT0	163 aa		13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	RDH12	Q96NR8	316 aa		13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	MRI1	Q9BV20	369 aa		13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	OCEL1	Q9H607	264 aa		13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	ERVK-18	Q9QC07	812 aa		13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	GNG8	Q9UK08	70 aa		13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	EXOG	Q9Y2C4	368 aa	Known RBP	13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	PCDHGB1	Q9Y5G3	927 aa		13.66	□□□□□ -0.22
CIRBP-233	ENST00000591622	IGHV2-70D	A0A0C4DH43	119 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	KIR2DS1	A0A191URI9	304 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	DAPL1	A0PJW8	107 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	OR5B21	A6NL26	309 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	DHRS7C	A6NNS2	312 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	SRRM5	B3KS81	715 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	ZNF732	B4DXR9	585 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	NRAS	P01111	189 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	CCL1	P22362	96 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	TP53I3	Q53FA7	332 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	DMRTC1	Q5HYR2	192 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	PLCXD3	Q63HM9	321 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	TMEM42	Q69YG0	159 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	BTNL3	Q6UXE8	466 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	MOB3C	Q70IA8	216 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	DOK3	Q7L591	496 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	FAM220A	Q7Z4H9	259 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	KCTD20	Q7Z5Y7	419 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	OR14K1	Q8NGZ2	314 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	C12orf43	Q96C57	262 aa	Known RBP	13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	TECTB	Q96PL2	329 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	OR51I2	Q9H344	312 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	ACOXL	Q9NUZ1	547 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	SMPD3	Q9NY59	655 aa	Predicted RBP	13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	KAAG1	Q9UBP8	84 aa		13.65	□□□□□ -0.22
CIRBP-233	ENST00000591622	DLGAP1	O14490	977 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	TMPRSS2	O15393	492 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	DBT	P11182	482 aa	Known RBP	13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	SRSF2	Q01130	221 aa	Known RBP	13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF91	Q05481	1191 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	RCN1	Q15293	331 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	ODF4	Q2M2E3	257 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	CDON	Q4KMG0	1287 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	CLVS2	Q5SYC1	327 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	CD276	Q5ZPR3	534 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	PRSS35	Q8N3Z0	413 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	ACBD7	Q8N6N7	88 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF555	Q8NEP9	628 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	RNF166	Q96A37	237 aa	Predicted RBP	13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	LGALS12	Q96DT0	336 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622	SEH1L	Q96EE3	360 aa		13.64	□□□□□ -0.23
CIRBP-233	ENST00000591622		A0A0A6YYJ9	748 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622		A0A1B0GVI7	797 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	C22orf46	C9J442	243 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	DVL1	O14640	695 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	AKR7A2	O43488	359 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	SYT7	O43581	403 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	PPIAL4G	P0DN37	164 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	LRRC36	Q1X8D7	754 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	KRTAP24-1	Q3LI83	254 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	ARMCX4	Q5H9R4	360 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	WDR38	Q5JTN6	314 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF418	Q8TF45	676 aa	Predicted RBP	13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	CCL13	Q99616	98 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	ADI1	Q9BV57	179 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	WDR13	Q9H1Z4	485 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	RASSF4	Q9H2L5	321 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	SMURF1	Q9HCE7	757 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	AMBN	Q9NP70	447 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622	C8orf4	Q9NR00	106 aa		13.63	□□□□□ -0.23
CIRBP-233	ENST00000591622		A6NIN4	97 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	ANKRD65	E5RJM6	399 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	ENSA	O43768	121 aa	Known RBP	13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	RHBDL1	O75783	438 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	KIR3DL2	P43630	455 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	OR12D2	P58182	307 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	GMFB	P60983	142 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	ELF3	P78545	371 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	KLF17	Q5JT82	389 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	LPCAT4	Q643R3	524 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	STUM	Q69YW2	141 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	PHC2	Q8IXK0	858 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	PACRGL	Q8N7B6	248 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	CCDC54	Q8NEL0	328 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	OR5T2	Q8NGG2	359 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	SPATA3	Q8NHX4	192 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF671	Q8TAW3	534 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	APH1B	Q8WW43	257 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	AQP3	Q92482	292 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	PLEKHA1	Q9HB21	404 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	GPR173	Q9NS66	373 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	DNAJB11	Q9UBS4	358 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	NUP50	Q9UKX7	468 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	MYRF	Q9Y2G1	1151 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622	COL6A5	A8TX70	2615 aa		13.62	□□□□□ -0.23
CIRBP-233	ENST00000591622		H3BSH0	61 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	FCN3	O75636	299 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	FADS2	O95864	444 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	LIPF	P07098	398 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	UBC	P0CG48	685 aa	Known RBP	13.61	□□□□□ -0.23

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