RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CLPSL1A2RUU4 121 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 CCDC182A6NF36 153 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 ZAR1LA6NP61 321 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 ANKRD30BLA7E2S9 258 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 APOC1P02654 83 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 GYPAP02724 150 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 IER3P46695 156 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 RAG2P55895 527 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 GABPB1Q06547 395 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-207ENST00000591519 CDONQ4KMG0 1287 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 ATPAF1Q5TC12 328 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-207ENST00000591519 OLFML2AQ68BL7 652 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 C12orf73Q69YU5 71 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 METAP1DQ6UB28 335 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-207ENST00000591519 SLC16A9Q7RTY1 509 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 LDLRAD3Q86YD5 345 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 TIGD4Q8IY51 512 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 PQLC1Q8N2U9 271 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 KIR3DL3Q8N743 410 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 BOLLQ8N9W6 283 aaKnown RBP8.58□□□□□ -1.04
VPS4B-207ENST00000591519 OR52H1Q8NGJ2 320 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 TBC1D15Q8TC07 691 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 THEM6Q8WUY1 208 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 RNF133Q8WVZ7 376 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 C12orf43Q96C57 262 aaKnown RBP8.58□□□□□ -1.04
VPS4B-207ENST00000591519 AMELYQ99218 206 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 PRRG3Q9BZD7 231 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 MARCH7Q9H992 704 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 H2AFY2Q9P0M6 372 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-207ENST00000591519 ENOPH1Q9UHY7 261 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 RPUSD1Q9UJJ7 312 aaKnown RBP8.58□□□□□ -1.04
VPS4B-207ENST00000591519 KPTNQ9Y664 436 aa8.58□□□□□ -1.04
VPS4B-207ENST00000591519 A6NLC8 198 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.57□□□□□ -1.04
VPS4B-207ENST00000591519 PRODHO43272 600 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 TBX1O43435 398 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 APOL3O95236 402 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ALPLP05186 524 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ANXA2P07355 339 aaKnown RBP8.57□□□□□ -1.04
VPS4B-207ENST00000591519 SLC2A5P22732 501 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 CFL1P23528 166 aaKnown RBP8.57□□□□□ -1.04
VPS4B-207ENST00000591519 HSD11B1P28845 292 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 TGM4P49221 684 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 CX3CR1P49238 355 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ALDH3A2P51648 485 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ARF6P62330 175 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 DEFA6Q01524 100 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 LRRC36Q1X8D7 754 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 MICBQ29980 383 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 PDLIM3Q53GG5 364 aaPredicted RBP8.57□□□□□ -1.04
VPS4B-207ENST00000591519 FAM76BQ5HYJ3 339 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 LCN1P1Q5VSP4 162 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 C17orf107Q6ZR85 190 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ZBTB49Q6ZSB9 765 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 SHFQ7M4L6 423 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 KRT74Q7RTS7 529 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 WDR86Q86TI4 376 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 GALNT4Q8N4A0 578 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 OR1M1Q8NGA1 313 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 OR8S1Q8NH09 359 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 FAM81AQ8TBF8 368 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 TMEM163Q8TC26 289 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 NPRL2Q8WTW4 380 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 LHX4Q969G2 390 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 UBE2FQ969M7 185 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 EME1Q96AY2 570 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 SLC29A1Q99808 456 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 C9orf16Q9BUW7 83 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ABHD6Q9BV23 337 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 GABARAPL3Q9BY60 117 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 TLNRD1Q9H1K6 362 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 RGCCQ9H4X1 137 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 ZNF319Q9P2F9 582 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 KLHDC2Q9Y2U9 406 aa8.57□□□□□ -1.04
VPS4B-207ENST00000591519 WNK1Q9H4A3 2382 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 hCG_38984A0A1B0GV85 526 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 A0A1B0GVI7 797 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 hCG_1807616A0A1W2PRN6 198 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 PSMD9O00233 223 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 CLPXO76031 633 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 LYNP07948 512 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 H2BFMP0C1H6 154 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 AMY2BP19961 511 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 PROK1P58294 105 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 SRSF4Q08170 494 aaKnown RBP8.56□□□□□ -1.04
VPS4B-207ENST00000591519 RCN1Q15293 331 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 SNCBQ16143 134 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 GFOD2Q3B7J2 385 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 SLC35D3Q5M8T2 416 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 WDR82Q6UXN9 313 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 C1orf122Q6ZSJ8 110 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 SLC36A1Q7Z2H8 476 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.56□□□□□ -1.04
VPS4B-207ENST00000591519 ZSCAN4Q8NAM6 433 aaPredicted RBP8.56□□□□□ -1.04
VPS4B-207ENST00000591519 CSNK2A3Q8NEV1 391 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 OTOSQ8NHW6 89 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 LINC01006Q8NI28 216 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 C8orf46Q8TAG6 207 aa8.56□□□□□ -1.04
VPS4B-207ENST00000591519 LRRC29Q8WV35 223 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms