RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 HRASLS2Q9NWW9 162 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 ALKBH4Q9NXW9 302 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 ASH2LQ9UBL3 628 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 B4GALT7Q9UBV7 327 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 MIOXQ9UGB7 285 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 CHRNA9Q9UGM1 479 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 CES1P1Q9UKY3 287 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 ASF1AQ9Y294 204 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 NOP16Q9Y3C1 178 aaKnown RBP3.65□□□□□ -1.83
LIG3-211ENST00000588713 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
LIG3-211ENST00000588713 TRAV27A0A087WT01 109 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 A0A087WV62 115 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 A0A0B4J2A0 478 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 A0A1W2PPK0 400 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 A0A1W2PPV9 198 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 A0A1W2PR48 441 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 C9orf170A2RU37 121 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 LRIT2A6NDA9 550 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR6C76A6NM76 312 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 GPR89AB7ZAQ6 455 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 AP4M1O00189 453 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ERI3O43414 337 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR1F1O43749 312 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR2T1O43869 369 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 LDB3O75112 727 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ICOSLGO75144 302 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CLN5O75503 358 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ERAL1O75616 437 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 SCGNO76038 276 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 AKR7A3O95154 331 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ZFPL1O95159 310 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 FARS2O95363 451 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 RAB3DO95716 219 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ABHD16AO95870 558 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PRB2P02812 416 aaPredicted RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 CD3DP04234 171 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 AMY2AP04746 511 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 SERPINA7P05543 415 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CD2P06729 351 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 SFTA3P0C7M3 94 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 GPR89BP0CG08 455 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CLUP10909 449 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 SLC2A1P11166 492 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 APEHP13798 732 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 ZNF14P17017 642 aaPredicted RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 ADRA2CP18825 462 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 BTF3P20290 206 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 EPHA1P21709 976 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ZBTB25P24278 435 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PRSS3P35030 304 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 MAS1LP35410 378 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 SRP14P37108 136 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 NAA10P41227 235 aaPredicted RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 GLP1RP43220 463 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PPICP45877 212 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 POU3F4P49335 361 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CENPAP49450 140 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 RAB28P51157 221 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CAV2P51636 162 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ATP1B3P54709 279 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 F2RL1P55085 397 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CLDN12P56749 244 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 MLF1P58340 268 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 NANOS3P60323 173 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 RAB2AP61019 212 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 SNRPEP62304 92 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 RPS4XP62701 263 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 CYCSP99999 105 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 DUSP2Q05923 314 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 EGR3Q06889 387 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 DPTQ07507 201 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 RASGEF1BQ0VAM2 473 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PON3Q15166 354 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 RAB11BQ15907 218 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ZNF239Q16600 458 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 MST1LQ2TV78 715 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 GFOD2Q3B7J2 385 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 GXYLT1Q4G148 440 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 LBHQ53QV2 105 aaPredicted RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 ACTBL2Q562R1 376 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 FAM76BQ5HYJ3 339 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 DCST2Q5T1A1 773 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CYB5R2Q6BCY4 276 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR10K2Q6IF99 312 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 FAM166AQ6J272 317 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 RHBDD2Q6NTF9 364 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 FDX2Q6P4F2 183 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ZCCHC12Q6PEW1 402 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PAPD4Q6PIY7 484 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 RBMS3Q6XE24 437 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 DPY19L2P2Q6ZN68 376 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 Q6ZPA2 131 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 HIST2H3AQ71DI3 136 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 HMGN2P46Q86SG4 172 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 SLC25A42Q86VD7 318 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OOSP2Q86WS3 158 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 WDSUB1Q8N9V3 476 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 MDS2Q8NDY4 140 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR5AP2Q8NGF4 316 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR52E2Q8NGJ4 325 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms