RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 SELEP16581 610 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF12P17014 697 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 GLYATL3Q5SZD4 288 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 SFXN4Q6P4A7 337 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 PGAP1Q75T13 922 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 MRPL21Q7Z2W9 205 aaKnown RBP17.14■□□□□ 0.33
ATG4D-208ENST00000588667 NR2C2APQ86WQ0 139 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 GTF3AQ92664 365 aaKnown RBP17.14■□□□□ 0.33
ATG4D-208ENST00000588667 KCTD12Q96CX2 325 aaKnown RBP17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ORAI1Q96D31 301 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 OR10A2Q9H208 303 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 MYOZ1Q9NP98 299 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-208ENST00000588667 NKIRAS2Q9NYR9 191 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 MED13LQ71F56 2210 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 C5orf63A6NC05 138 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ZSCAN5BA6NJL1 495 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 IQCF6A8MYZ5 107 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 CLDN25C9JDP6 229 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 RGS5O15539 181 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 INHBBP09529 407 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 CSF3P09919 207 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 CCL1P22362 96 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 PSMD7P51665 324 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 OR10A3P58181 314 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF92Q03936 586 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 IDNKQ5T6J7 187 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 OR2T2Q6IF00 324 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 MZT2AQ6P582 158 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 CLEC2AQ6UVW9 174 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 DOK3Q7L591 496 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF525Q8N782 197 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 CCDC54Q8NEL0 328 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 OR2AE1Q8NHA4 323 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 GPR84Q9NQS5 396 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF275Q9NSD4 429 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF319Q9P2F9 582 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 ZDHHC8Q9ULC8 765 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 FOXJ3Q9UPW0 622 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 A0A0G2JK05 382 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 A0A1B0GTI1 187 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 TBX1O43435 398 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 TMEM127O75204 238 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 ADH4P08319 380 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 FSTP19883 344 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 DSCR9P59020 149 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 CEP78Q5JTW2 689 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 FAM209AQ5JX71 171 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 DDI2Q5TDH0 399 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 SPSB4Q96A44 273 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 CEP19Q96LK0 163 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 DIRC2Q96SL1 478 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 REPIN1Q9BWE0 567 aaKnown RBP17.13■□□□□ 0.33
ATG4D-208ENST00000588667 WDR12Q9GZL7 423 aaKnown RBP17.13■□□□□ 0.33
ATG4D-208ENST00000588667 ZCCHC4Q9H5U6 513 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 MSL2Q9HCI7 577 aa17.13■□□□□ 0.33
ATG4D-208ENST00000588667 AK6Q9Y3D8 172 aaKnown RBP17.13■□□□□ 0.33
ATG4D-208ENST00000588667 TRAV8-7A0A075B6U6 113 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 CTDSP2O14595 271 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 IGHV1-46P01743 117 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 DAOP14920 347 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 GFOD2Q3B7J2 385 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 OR5AS1Q8N127 324 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 OR8G5Q8NG78 346 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 RGCCQ9H4X1 137 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 AKIP1Q9NQ31 210 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 DAPK2Q9UIK4 370 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF391Q9UJN7 358 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 V9GY05 133 aa17.12■□□□□ 0.33
ATG4D-208ENST00000588667 ANKRD61A6NGH8 418 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 SPRY3O43610 288 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 IGLV3-1P01715 115 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 PRSS12P56730 875 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 DYNC1I2Q13409 638 aaKnown RBP17.11■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF846Q147U1 533 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 Q6ZR03 302 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 LRRTM1Q86UE6 522 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 SERPINA12Q8IW75 414 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 PARP16Q8N5Y8 322 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 FAM168AQ92567 244 aa17.11■□□□□ 0.33
ATG4D-208ENST00000588667 FAM71F1Q96KD3 344 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-208ENST00000588667 ANXA2P2A6NMY6 339 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 MTRF1O75570 445 aaKnown RBP17.1■□□□□ 0.33
ATG4D-208ENST00000588667 HPXP02790 462 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 MAS1P04201 325 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF20P17024 532 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 PDLIM4P50479 330 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 PPP3R1P63098 170 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 CCL8P80075 99 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 PLPP7Q8NBV4 271 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 BHLHE23Q8NDY6 225 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 UBASH3BQ8TF42 649 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 FGGYQ96C11 551 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 REEP6Q96HR9 211 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 PLEKHA1Q9HB21 404 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 COMMD3Q9UBI1 195 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 CD55P08174 381 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 MRPS11P82912 194 aaKnown RBP17.1■□□□□ 0.33
ATG4D-208ENST00000588667 SPANXN2Q5MJ10 180 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 OR5D14Q8NGL3 314 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 SGK3Q96BR1 496 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms