RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 TAAR5O14804 337 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 DHRS3O75911 302 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 PMP2P02689 132 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 CRHP06850 196 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 PRKACBP22694 351 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 PTGFRP43088 359 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 SSR4P51571 173 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 SUCLG1P53597 346 aaKnown RBP12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 CLDN17P56750 224 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 HIST1H3AP68431 136 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 INPP5JQ15735 1006 aaPredicted RBP12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 HIST2H3AQ71DI3 136 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 FAM57BQ71RH2 274 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 KCTD9Q7L273 389 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 SLC38A9Q8NBW4 561 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 OR51T1Q8NGJ9 327 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 SAP25Q8TEE9 199 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 ST8SIA4Q92187 359 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 FAM71F1Q96KD3 344 aaPredicted RBP12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 LINC00052Q96N35 136 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 C14orf166Q9Y224 244 aaKnown RBP12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 V9GYS6 101 aa12.37□□□□□ -0.43
NEDD4L-223ENST00000588516 KNL1Q8NG31 2342 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 FER1L5A0AVI2 2057 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 A0A1W2PNR3 127 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 MFNGO00587 321 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 SSX5O60225 188 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 CER1O95813 267 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 RLN2P04090 185 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 NAT2P11245 290 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 POU3F2P20265 443 aaPredicted RBP12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 H3F3AP84243 136 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 TUSC1Q2TAM9 212 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 CARD17Q5XLA6 110 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 TFAP2EQ6VUC0 442 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 ARMC10Q8N2F6 343 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 WDSUB1Q8N9V3 476 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 MARCH1Q8TCQ1 289 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 KCNE4Q8WWG9 221 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 MARC2Q969Z3 335 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 SPSB1Q96BD6 273 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 NPAS1Q99742 590 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 PIGQQ9BRB3 760 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 TM2D1Q9BX74 207 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 PNRC2Q9NPJ4 139 aaKnown RBP12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 ZFP57Q9NU63 452 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 DKKL1Q9UK85 242 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 FLVCR1Q9Y5Y0 555 aa12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 CHCHD2Q9Y6H1 151 aaPredicted RBP12.36□□□□□ -0.43
NEDD4L-223ENST00000588516 LOC101059948A0A1B0GTJ6 334 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 A0A1W2PQM1 296 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 F8VVB4 439 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 F8VWA3 439 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 DHHO43323 396 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 CBR3O75828 277 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 ICAM2P13598 275 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 ABOP16442 354 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 SFTPDP35247 375 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 LUMP51884 338 aaPredicted RBP12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 ATP1B3P54709 279 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 RAC1P63000 192 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 MRPS34P82930 218 aaKnown RBP12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 PCOLCEQ15113 449 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 CNN3Q15417 329 aaKnown RBP12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 KISS1Q15726 138 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 MICBQ29980 383 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 CHRFAM7AQ494W8 412 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 OR52W1Q6IF63 320 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 PRSS54Q6PEW0 395 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 DHRS13Q6UX07 377 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 DRAM2Q6UX65 266 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 GVQW1Q8N7I0 195 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 AGBL5Q8NDL9 886 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 CSNK2A3Q8NEV1 391 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 RNF141Q8WVD5 230 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 HAS2Q92819 552 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 CMBLQ96DG6 245 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 SEC22AQ96IW7 307 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 SGCZQ96LD1 299 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 C2orf50Q96LR7 162 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 TECTBQ96PL2 329 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 ZNF416Q9BWM5 594 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 CHST5Q9GZS9 411 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
NEDD4L-223ENST00000588516 COL6A6A6NMZ7 2263 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 C13orf42A0A1B0GVH6 325 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 EEF1E1-BLOC1S5C9J1V9 151 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 RER1O15258 196 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 TIAF1O95411 115 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 ZNF883P0CG24 379 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 LYL1P12980 280 aa12.34□□□□□ -0.43
NEDD4L-223ENST00000588516 MYF5P13349 255 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms