RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CCDC182A6NF36 153 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 PRR32B1ATL7 298 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 RNASEK-C17orf49H0YIS7 233 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 FKBP6O75344 327 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 RHBDL1O75783 438 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 ANXA8P13928 327 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 DCTDP32321 178 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 IER3P46695 156 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 FLOT2Q14254 428 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 SNAPC1Q16533 368 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 FAM76BQ5HYJ3 339 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 CEP78Q5JTW2 689 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 ZNF788Q6ZQV5 615 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 LDLRAD3Q86YD5 345 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 PNKDQ8N490 385 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 ANGPTL6Q8NI99 470 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 DYRK2Q92630 601 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 PPP1R14AQ96A00 147 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 HIST1H2AAQ96QV6 131 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 NIPAL2Q9H841 368 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 SLC25A19Q9HC21 320 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 ABCB9Q9NP78 766 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 FAM206AQ9NX38 181 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 DNAJB9Q9UBS3 223 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 DOCK11Q5JSL3 2073 aa11.78□□□□□ -0.52
VMP1-206ENST00000587945 ZNF816-ZNF321PA0A0X1KG74 233 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 TCRBV3S1A0A5B6 114 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 NKX6-3A6NJ46 265 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 ZNF732B4DXR9 585 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 GPR37O15354 613 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 GYG2O15488 501 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 NDUFB7P17568 137 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 GABRA2P47869 451 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 TAF9Q16594 264 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 BCDIN3DQ7Z5W3 292 aaKnown RBP11.77□□□□□ -0.53
VMP1-206ENST00000587945 CMTM4Q8IZR5 234 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 TEAD3Q99594 435 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 YIPF3Q9GZM5 350 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 OR51I2Q9H344 312 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 ELL3Q9HB65 397 aaPredicted RBP11.77□□□□□ -0.53
VMP1-206ENST00000587945 NLKQ9UBE8 527 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 SLC25A10Q9UBX3 287 aaPredicted RBP11.77□□□□□ -0.53
VMP1-206ENST00000587945 COPS3Q9UNS2 423 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 RNF114Q9Y508 228 aa11.77□□□□□ -0.53
VMP1-206ENST00000587945 TMEM269A0A1B0GVZ9 245 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 OR2AT4A6NND4 320 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 M0R129 80 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 PRKYO43930 277 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 ACAA1P09110 424 aaPredicted RBP11.76□□□□□ -0.53
VMP1-206ENST00000587945 GLRA1P23415 457 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 MAP2K3P46734 347 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 DAPP51397 102 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 CRISP1P54107 249 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 DEFA6Q01524 100 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 METAP1DQ6UB28 335 aaPredicted RBP11.76□□□□□ -0.53
VMP1-206ENST00000587945 MOB3CQ70IA8 216 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 TRPM8Q7Z2W7 1104 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 COMMD2Q86X83 199 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 PAPD5Q8NDF8 572 aaKnown RBP11.76□□□□□ -0.53
VMP1-206ENST00000587945 LINC01006Q8NI28 216 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 C8orf46Q8TAG6 207 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 OR51E1Q8TCB6 317 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 TNFRSF14Q92956 283 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 MED30Q96HR3 178 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 TEX12Q9BXU0 123 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 PBOV1Q9GZY1 135 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 DNTTIP1Q9H147 329 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 YY1AP1Q9H869 796 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 GPR84Q9NQS5 396 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 PAPOLBQ9NRJ5 636 aaKnown RBP11.76□□□□□ -0.53
VMP1-206ENST00000587945 POMPQ9Y244 141 aa11.76□□□□□ -0.53
VMP1-206ENST00000587945 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 NPFFO15130 113 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 FBP1P09467 338 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 PSG2P11465 335 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 FAHP16930 419 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 HOXB6P17509 224 aaKnown RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 EEF1B2P24534 225 aaKnown RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 GNG3P63215 75 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 MFGE8Q08431 387 aaPredicted RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 CEACAM21Q3KPI0 293 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 DNAL1Q4LDG9 190 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 KCTD18Q6PI47 426 aaPredicted RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 HAGHLQ6PII5 290 aaPredicted RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 Q6ZSV7 163 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 SLC7A6OSQ96CW6 309 aaPredicted RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 DUS3LQ96G46 650 aaKnown RBP11.75□□□□□ -0.53
VMP1-206ENST00000587945 OR8B4Q96RC9 309 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 CITED1Q99966 193 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 MROQ9BYG7 248 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 DPAGT1Q9H3H5 408 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 ZNRD1Q9P1U0 126 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 IKZF2Q9UKS7 526 aa11.75□□□□□ -0.53
VMP1-206ENST00000587945 MAB21L2Q9Y586 359 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms