RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 GLCCI1Q86VQ1 547 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 CSNK2A3Q8NEV1 391 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 LPAR5Q9H1C0 372 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 ELL3Q9HB65 397 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-204ENST00000587339 MTFP1Q9UDX5 166 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 TINAGQ9UJW2 476 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 IGKV1-27A0A075B6S5 117 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 OR5H1A6NKK0 313 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 ZP1P60852 638 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 GUCA2AQ02747 115 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 ZNF474Q6S9Z5 364 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-204ENST00000587339 WBP1Q96G27 269 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 NICN1Q9BSH3 213 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 URM1Q9BTM9 101 aaKnown RBP17.11■□□□□ 0.33
TRIM47-204ENST00000587339 ZNF835Q9Y2P0 537 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 ANKRD20A5PA0PJZ0 165 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 CD300LBA8K4G0 201 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 ICMTO60725 284 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 CHRM2P08172 466 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 BTCP35070 178 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 ATP1B3P54709 279 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 CDH24Q86UP0 819 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 CHST4Q8NCG5 386 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 ZCCHC14Q8WYQ9 949 aaKnown RBP17.1■□□□□ 0.33
TRIM47-204ENST00000587339 CMBLQ96DG6 245 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 NUDT16L1Q9BRJ7 211 aaKnown RBP17.1■□□□□ 0.33
TRIM47-204ENST00000587339 GPR160Q9UJ42 338 aa17.1■□□□□ 0.33
TRIM47-204ENST00000587339 SULT1C2O00338 296 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 SMPD2O60906 423 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 CST4P01036 141 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 MT-ND4P03905 459 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 SERPINA2P20848 420 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 IL32P24001 234 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 OPRM1P35372 400 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 PRDX4Q13162 271 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 BHLHE23Q8NDY6 225 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 OR10R2Q8NGX6 335 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 GPX8Q8TED1 209 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 RNF170Q96K19 258 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 SCPEP1Q9HB40 452 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 TAS2R8Q9NYW2 309 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 TMEM235A6NFC5 223 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 PLATP00750 562 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 LPLP06858 475 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 MGMTP16455 207 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 BMP5P22003 454 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 RBPJQ06330 500 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 PCGF3Q3KNV8 242 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 ZNF260Q3ZCT1 412 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 PLA1AQ53H76 456 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 SPATA46Q5T0L3 261 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 Q6ZTK2 550 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 OR10K1Q8NGX5 313 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 AQP3Q92482 292 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 UPRTQ96BW1 309 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 SEH1LQ96EE3 360 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 DPAGT1Q9H3H5 408 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 SH3BGRL2Q9UJC5 107 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 AMDHD2Q9Y303 409 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 NCOR2Q9Y618 2525 aa17.09■□□□□ 0.33
TRIM47-204ENST00000587339 MEIS3P1A6NDR6 274 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 WIPF3A6NGB9 483 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 MSTNO14793 375 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 SPRY1O43609 319 aaPredicted RBP17.08■□□□□ 0.33
TRIM47-204ENST00000587339 PPP1CBP62140 327 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 RPS27AP62979 156 aaKnown RBP17.08■□□□□ 0.33
TRIM47-204ENST00000587339 CDNFQ49AH0 187 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 RSBN1Q5VWQ0 802 aaPredicted RBP17.08■□□□□ 0.33
TRIM47-204ENST00000587339 ZDHHC23Q8IYP9 409 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 OR56B1Q8NGI3 324 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 MARVELD1Q9BSK0 173 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 SELENOIQ9C0D9 397 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 METTL9Q9H1A3 318 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 HRASLSQ9HDD0 168 aa17.08■□□□□ 0.33
TRIM47-204ENST00000587339 ELF5Q9UKW6 265 aaPredicted RBP17.08■□□□□ 0.33
TRIM47-204ENST00000587339 MYO7BQ6PIF6 2116 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 A0A0A6YYD4 124 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 ANGPTL7O43827 346 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 CSF1P09603 554 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 GIFP27352 417 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 UCP2P55851 309 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 ACTBP60709 375 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 ACTG1P63261 375 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 SSBP1Q04837 148 aaKnown RBP17.08■□□□□ 0.32
TRIM47-204ENST00000587339 KLRB1Q12918 225 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 RSU1Q15404 277 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 CARTPTQ16568 116 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 STEAP2Q8NFT2 490 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 OR51T1Q8NGJ9 327 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 CCDC120Q96HB5 630 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 NEURL2Q9BR09 285 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 CACNG6Q9BXT2 260 aa17.08■□□□□ 0.32
TRIM47-204ENST00000587339 DSPP15924 2871 aaKnown RBP17.07■□□□□ 0.32
TRIM47-204ENST00000587339 NAP1L6A6NFF2 107 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 ANKRD30BLA7E2S9 258 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 CSTBP04080 98 aaKnown RBP17.07■□□□□ 0.32
TRIM47-204ENST00000587339 CEACAM21Q3KPI0 293 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 FBXW12Q6X9E4 464 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 DEDD2Q8WXF8 326 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 CREB3L1Q96BA8 519 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms