RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PECRQ9BY49 303 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SLC5A7Q9GZV3 580 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TLX3O43711 291 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 HPNP05981 417 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FKBP2P26885 142 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 HFEQ30201 348 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF385CQ66K41 422 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SLC16A14Q7RTX9 510 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ADAMTS17Q8TE56 1095 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SGK3Q96BR1 496 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 RASL10BQ96S79 203 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TLNRD1Q9H1K6 362 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SDK1Q7Z5N4 2213 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 A0A0U1RQV5 110 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF705EA8MWA4 302 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 STMND1H3BQB6 276 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 H7C2Y5 167 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 THBS4P35443 961 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CLDN17P56750 224 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SLC35A1P78382 337 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PJVKQ0ZLH3 352 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 UBE2V2Q15819 145 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 NPRL2Q8WTW4 380 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MAFIPQ8WZ33 124 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 WNT2BQ93097 391 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 USB1Q9BQ65 265 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ADAT1Q9BUB4 502 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CRB3Q9BUF7 120 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TM2D1Q9BX74 207 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF160Q9HCG1 818 aa12.46□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PMS2P1A4D2B8 440 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MBTPS2O43462 519 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DHRS3O75911 302 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 NR2C1P13056 603 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MSR1P21757 451 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DHRS7BQ6IAN0 325 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 H3F3CQ6NXT2 135 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HAGHLQ6PII5 290 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SAT2Q96F10 170 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SMIM8Q96KF7 97 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 NECAB3Q96P71 396 aaPredicted RBP12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SEC11CQ9BY50 192 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 V9GYS6 101 aa12.46□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ONECUT2O95948 504 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SERPINA2P20848 420 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF84P51523 738 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 H3F3AP84243 136 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ARL6IP1Q15041 203 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SHBQ15464 509 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CHRFAM7AQ494W8 412 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SPAG16Q8N0X2 631 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 GJC3Q8NFK1 279 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PP6455Q8WZ26 134 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF775Q96BV0 537 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PHF7Q9BWX1 381 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CHST5Q9GZS9 411 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 NELFAQ9H3P2 528 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 OR2S2Q9NQN1 319 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RARRES3Q9UL19 164 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CHCHD2Q9Y6H1 151 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MED12Q93074 2177 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 F5H5K5 113 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CA11O75493 328 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HOXB5P09067 269 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CPT2P23786 658 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 GUCA1AP43080 201 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 C10orf128Q5T292 105 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TMEM200AQ86VY9 491 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DTX1Q86Y01 620 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FAM219AQ8IW50 185 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 LINC00518Q8N0U6 118 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 HAS2Q92819 552 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 DEFB126Q9BYW3 111 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TREM1Q9NP99 234 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 GSKIPQ9P0R6 139 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 MEMO1Q9Y316 297 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ZNF175Q9Y473 711 aa12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-237ENST00000585163 TAAR5O14804 337 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 SNAPINO95295 136 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 KNG1P01042 644 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FCGR2AP12318 317 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 FAHP16930 419 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CSNK1A1P48729 337 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 EIF5AP63241 154 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 PPA1Q15181 289 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 RSPO1Q2MKA7 263 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 LCN10Q6JVE6 187 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 Q6ZSR3 168 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 CBLN2Q8IUK8 224 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 C19orf25Q9UFG5 118 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 C14orf166Q9Y224 244 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 IFNA2P01563 188 aa12.44□□□□□ -0.42
CDK5RAP3-237ENST00000585163 OTX1P32242 354 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms