RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 YIF1BQ5BJH7 314 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 SERPINA12Q8IW75 414 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 CIARTQ8N365 385 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-215ENST00000584944 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
TRAF4-215ENST00000584944 OR14K1Q8NGZ2 314 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 OR5P3Q8WZ94 311 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 SGCDQ92629 289 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 CPNE2Q96FN4 548 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-215ENST00000584944 SOX7Q9BT81 388 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 GCM1Q9NP62 436 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 GPR173Q9NS66 373 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 ZNF275Q9NSD4 429 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-215ENST00000584944 TMEM106BQ9NUM4 274 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 C1orf123Q9NWV4 160 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 LRRC42Q9Y546 428 aa11.74□□□□□ -0.53
TRAF4-215ENST00000584944 FAM230AA0A1W2PPH8 454 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 ZNF732B4DXR9 585 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 OGG1O15527 345 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 CYB5AP00167 134 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 IGLV3-1P01715 115 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 PRKACBP22694 351 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 MAP2K4P45985 399 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 TNK1Q13470 666 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 TBCEQ15813 527 aaPredicted RBP11.73□□□□□ -0.53
TRAF4-215ENST00000584944 KCTD21Q4G0X4 260 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 PRAMEF6Q5VXH4 476 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 XAF1Q6GPH4 301 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 ZNF367Q7RTV3 350 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 ZNF573Q86YE8 665 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 OR5A2Q8NGI9 324 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 TRMT10AQ8TBZ6 339 aaKnown RBP11.73□□□□□ -0.53
TRAF4-215ENST00000584944 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 NPRL2Q8WTW4 380 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 FCGR1BQ92637 280 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 ITPKCQ96DU7 683 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 BORCS8Q96FH0 119 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 CHST5Q9GZS9 411 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 PCDHB10Q9UN67 800 aa11.73□□□□□ -0.53
TRAF4-215ENST00000584944 HIVEP2P31629 2446 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 A0A1B0GWJ7 208 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 LRP5LA4QPB2 252 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 TRIM64A6NGJ6 449 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 TRIM64BA6NI03 449 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 RNF223E7ERA6 249 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 H7C1Q1 480 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 SMAD7O15105 426 aaKnown RBP11.72□□□□□ -0.53
TRAF4-215ENST00000584944 HCKP08631 526 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-215ENST00000584944 GATA4P43694 442 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 MAB21L1Q13394 359 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 KCNJ8Q15842 424 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 DMKNQ6E0U4 476 aaPredicted RBP11.72□□□□□ -0.53
TRAF4-215ENST00000584944 ZNF773Q6PK81 442 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 MS4A15Q8N5U1 240 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 OR1M1Q8NGA1 313 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 OR51A4Q8NGJ6 313 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 ZNF671Q8TAW3 534 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 YIPF5Q969M3 257 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 TMEM106AQ96A25 262 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 OR5M11Q96RB7 305 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 GAL3ST1Q99999 423 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 TMED9Q9BVK6 235 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 REG4Q9BYZ8 158 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 NARFLQ9H6Q4 476 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 RNF7Q9UBF6 113 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 ARFGEF3Q5TH69 2177 aa11.72□□□□□ -0.53
TRAF4-215ENST00000584944 IGHV4-30-2A0A087WSY4 118 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 PLPP2O43688 288 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 RAB3AP20336 220 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 PSMA1P25786 263 aaKnown RBP11.71□□□□□ -0.53
TRAF4-215ENST00000584944 GIFP27352 417 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 PSMB9P28065 219 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 NR4A2P43354 598 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 FUT6P51993 359 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 ATP1B3P54709 279 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 MTCP1P56278 107 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 ACSM1Q08AH1 577 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 MLLT11Q13015 90 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-215ENST00000584944 GPR50Q13585 617 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 IRF3Q14653 427 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 TRAM1Q15629 374 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 MPPED2Q15777 294 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 Q499Y3 187 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 DMRTC1Q5HYR2 192 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 AVPI1Q5T686 147 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 LIPKQ5VXJ0 399 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 MUC20Q8N307 709 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-215ENST00000584944 TSPAN14Q8NG11 270 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 OR13C9Q8NGT0 318 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 OR10AC1Q8NH08 325 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 ZNF420Q8TAQ5 688 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-215ENST00000584944 ADAT3Q96EY9 351 aaPredicted RBP11.71□□□□□ -0.53
TRAF4-215ENST00000584944 GPER1Q99527 375 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 MGLLQ99685 303 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 ZCCHC4Q9H5U6 513 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 DNAJB11Q9UBS4 358 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 POLDIP2Q9Y2S7 368 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 CACNG2Q9Y698 323 aa11.71□□□□□ -0.53
TRAF4-215ENST00000584944 A0A087WXM4 84 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms