RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ZNF829Q3KNS6 432 aaPredicted RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 VPS26BQ4G0F5 336 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 TP53I3Q53FA7 332 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 FAM120AOSQ5T036 256 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 DCST2Q5T1A1 773 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 FAHD2BQ6P2I3 314 aaPredicted RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 ENPP6Q6UWR7 440 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 C12orf54Q6X4T0 127 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 CYS1Q717R9 158 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 TPRA1Q86W33 373 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 RPS19BP1Q86WX3 136 aaKnown RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 VRK2Q86Y07 508 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 SLC13A5Q86YT5 568 aaPredicted RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 NKAIN4Q8IVV8 208 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 MCOLN2Q8IZK6 566 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 ST13P4Q8IZP2 240 aaPredicted RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 KRT222Q8N1A0 295 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 CYP4Z2PQ8N1L4 340 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 APCDD1LQ8NCL9 501 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 OR5L2Q8NGL0 311 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 CLHC1Q8NHS4 586 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 LRRC20Q8TCA0 184 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 MARCH1Q8TCQ1 289 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 BLOC1S5Q8TDH9 187 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 ACMSDQ8TDX5 336 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 C17orf50Q8WW18 174 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 ASZ1Q8WWH4 475 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 IL1F10Q8WWZ1 152 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 UBE2E3Q969T4 207 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 IMP4Q96G21 291 aaKnown RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 CERS2Q96G23 380 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 FAHD2AQ96GK7 314 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 TIMD4Q96H15 378 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 ARL5BQ96KC2 179 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 CNN2Q99439 309 aaKnown RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 FMO2Q99518 471 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 TSG101Q99816 390 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 NIPSNAP3BQ9BS92 247 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 DEFB126Q9BYW3 111 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 OPN3Q9H1Y3 402 aaPredicted RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 SPNS1Q9H2V7 528 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 NIPAL2Q9H841 368 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 TRIM45Q9H8W5 580 aaPredicted RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 PLEKHA3Q9HB20 300 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 NMRAL1Q9HBL8 299 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 SPACA1Q9HBV2 294 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 TREM1Q9NP99 234 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 CCNB1IP1Q9NPC3 277 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 ESM1Q9NQ30 184 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 PNO1Q9NRX1 252 aaKnown RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 SIGLEC8Q9NYZ4 499 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 THYN1Q9P016 225 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 DHRS4-AS1Q9P1J3 65 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 NXT1Q9UKK6 140 aaKnown RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 AK6Q9Y3D8 172 aaKnown RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 OARD1Q9Y530 152 aa1.85□□□□□ -2.11
VAPA-208ENST00000584796 V9GYY5 206 aaPredicted RBP1.85□□□□□ -2.11
VAPA-208ENST00000584796 IGLV3-16A0A075B6K0 115 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 TRBV5-4A0A0C4DH59 114 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 TRBV7-9A0A0J9YWB2 115 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 KBTBD11-OT1A0A1B0GTJ5 212 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 LOC285095A0A1B0GVY8 99 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 CCT8L1PA6NM43 557 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 ZNF724A8MTY0 619 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 SERPINE3A8MV23 424 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 FBP2O00757 339 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 PSTPIP1O43586 416 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 TNFSF13O75888 250 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 OR2J2O76002 312 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 SRP72O76094 671 aaKnown RBP1.84□□□□□ -2.11
VAPA-208ENST00000584796 AP2A1O95782 977 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 EPPINO95925 133 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 IGKV3-11P04433 115 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 P04436 131 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 S100A6P06703 90 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 CCDC166P0CW27 439 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 UCHL3P15374 230 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 HPGDP15428 266 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 ZNF43P17038 809 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 KITLGP21583 273 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 CRYGSP22914 178 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 CXCR2P25025 360 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 CCR7P32248 378 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 IFNA8P32881 189 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 SHMT2P34897 504 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 OPRM1P35372 400 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 COILP38432 576 aaPredicted RBP1.84□□□□□ -2.11
VAPA-208ENST00000584796 GPR4P46093 362 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 XCR1P46094 333 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 HCAR3P49019 387 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 CLDN18P56856 261 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 OR4D2P58180 307 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 RPL26P61254 145 aaKnown RBP1.84□□□□□ -2.11
VAPA-208ENST00000584796 RPS27AP62979 156 aaKnown RBP1.84□□□□□ -2.11
VAPA-208ENST00000584796 PLGLB1Q02325 96 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 IRF8Q02556 426 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 SLAQ13239 276 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 ITIH4Q14624 930 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 ABRAXAS2Q15018 415 aa1.84□□□□□ -2.11
VAPA-208ENST00000584796 PAFAH1B3Q15102 231 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms