RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MS4A7Q9GZW8 240 aaPredicted RBP16.97■□□□□ 0.31
SS18-224ENST00000584083 DNAJB11Q9UBS4 358 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 ENPP5Q9UJA9 477 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 SRRM5B3KS81 715 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.96■□□□□ 0.31
SS18-224ENST00000584083 DVL1O14640 695 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 DHRS3O75911 302 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 FGF12P61328 243 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 FAM76BQ5HYJ3 339 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 DMRTC1Q5HYR2 192 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 WDR38Q5JTN6 314 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 ZBTB37Q5TC79 503 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 PLCXD3Q63HM9 321 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 BCL6BQ8N143 479 aaPredicted RBP16.96■□□□□ 0.31
SS18-224ENST00000584083 OR5T2Q8NGG2 359 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 OR10Z1Q8NGY1 313 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 HRASLS5Q96KN8 279 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 S100A14Q9HCY8 104 aa16.96■□□□□ 0.31
SS18-224ENST00000584083 TRAV40A0A0B4J280 105 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 METTL15A6NJ78 407 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 P2RY10O00398 339 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 AKR7A2O43488 359 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 NRASP01111 189 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 LIPFP07098 398 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 IGHV4-38-2P0DP08 117 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 ELF3P78545 371 aaPredicted RBP16.95■□□□□ 0.3
SS18-224ENST00000584083 ZNF684Q5T5D7 378 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 KRT74Q7RTS7 529 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 SLC36A1Q7Z2H8 476 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 SIGLECL1Q8N7X8 197 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 PNLDC1Q8NA58 520 aaKnown RBP16.95■□□□□ 0.3
SS18-224ENST00000584083 OR5A2Q8NGI9 324 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 ST8SIA4Q92187 359 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 C9orf16Q9BUW7 83 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 WDR13Q9H1Z4 485 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 SNTG1Q9NSN8 517 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 KAAG1Q9UBP8 84 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.95■□□□□ 0.3
SS18-224ENST00000584083 SLC22A13Q9Y226 551 aa16.95■□□□□ 0.3
SS18-224ENST00000584083 OR5B21A6NL26 309 aa16.94■□□□□ 0.3
SS18-224ENST00000584083 ENTPD6O75354 484 aa16.94■□□□□ 0.3
SS18-224ENST00000584083 MTNR1AP48039 350 aa16.94■□□□□ 0.3
SS18-224ENST00000584083 BTN2A1Q7KYR7 527 aa16.94■□□□□ 0.3
SS18-224ENST00000584083 C12orf43Q96C57 262 aaKnown RBP16.94■□□□□ 0.3
SS18-224ENST00000584083 PCGF1Q9BSM1 259 aa16.94■□□□□ 0.3
SS18-224ENST00000584083 OR51I2Q9H344 312 aa16.94■□□□□ 0.3
SS18-224ENST00000584083 A0A1B0GTI1 187 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 A0A1B0GW55 424 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 SULT1C4O75897 302 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 ECDO95905 644 aaPredicted RBP16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4L2P0CJ85 424 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4L3P0CJ86 424 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4L4P0CJ87 422 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4L5P0CJ88 424 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4L6P0CJ89 424 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4L7P0CJ90 424 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 SNRPGP62308 76 aaKnown RBP16.93■□□□□ 0.3
SS18-224ENST00000584083 ACTG1P63261 375 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 ODF4Q2M2E3 257 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 CLVS2Q5SYC1 327 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4L9Q6RFH8 374 aaPredicted RBP16.93■□□□□ 0.3
SS18-224ENST00000584083 DOK3Q7L591 496 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 FAM220AQ7Z4H9 259 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 PQLC1Q8N2U9 271 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 FAM216BQ8N7L0 139 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 ZNF671Q8TAW3 534 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 FAM216AQ8WUB2 273 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 MBOAT4Q96T53 435 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 ESM1Q9NQ30 184 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 DUX4Q9UBX2 424 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 GNG8Q9UK08 70 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 GMPPBQ9Y5P6 360 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 V9GYS6 101 aa16.93■□□□□ 0.3
SS18-224ENST00000584083 A0A1B0GVI7 797 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 A6NIN4 97 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 NKX6-3A6NJ46 265 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 ZNF879B4DU55 563 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 NDUFB3O43676 98 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 FCN3O75636 299 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 RHBDL1O75783 438 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 TOX4O94842 621 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 BAG2O95816 211 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 GLRA1P23415 457 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 IKZF1Q13422 519 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 MEDAGQ5VYS4 303 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 STUMQ69YW2 141 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 HAGHLQ6PII5 290 aaPredicted RBP16.92■□□□□ 0.3
SS18-224ENST00000584083 ZBTB49Q6ZSB9 765 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 CATSPERDQ86XM0 798 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 FGFRL1Q8N441 504 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 ZDHHC22Q8N966 263 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 OR14K1Q8NGZ2 314 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 RORBQ92753 470 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 RNFT2Q96EX2 444 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 ADI1Q9BV57 179 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 GPR173Q9NS66 373 aa16.92■□□□□ 0.3
SS18-224ENST00000584083 SNTNA6NMZ2 147 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 H3BSH0 61 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 PLATP00750 562 aa16.91■□□□□ 0.3
SS18-224ENST00000584083 SFTPBP07988 381 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms