RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 NTSP30990 170 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 S100A11P31949 105 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MAP3K8P41279 467 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 GPR1P46091 355 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR3A1P47881 315 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 CCR6P51684 374 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 NCBP2P52298 156 aaKnown RBP eCLIP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 AP3S2P59780 193 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 RPS11P62280 158 aaKnown RBP eCLIP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ACTC1P68032 377 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ACTA1P68133 377 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 CTAG1AP78358 180 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 IL24Q13007 206 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 GGTLC2Q14390 218 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 INSL4Q14641 139 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ISXQ2M1V0 245 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF791Q3KP31 576 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC25A35Q3KQZ1 300 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 EIPR1Q53HC9 387 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 UBE2NLQ5JXB2 153 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 C9orf64Q5T6V5 341 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 FAM166AQ6J272 317 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 FAM199XQ6PEV8 388 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SIGLEC15Q6ZMC9 328 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 FRRS1Q6ZNA5 592 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC36A1Q7Z2H8 476 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 TRMT11Q7Z4G4 463 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 TMCO2Q7Z6W1 182 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 VRK2Q86Y07 508 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 NRMQ8IXM6 262 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 CDK20Q8IZL9 346 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 POM121L12Q8N7R1 296 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM99Q8N816 258 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 BBS1Q8NFJ9 593 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2L5Q8NG80 312 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5T2Q8NGG2 359 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR51G2Q8NGK0 314 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5AR1Q8NGP9 310 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2A1Q8NGT9 310 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2T35Q8NGX2 323 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR10Z1Q8NGY1 313 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2L8Q8NGY9 312 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR51Q1Q8NH59 317 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ZPLD1Q8TCW7 415 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 THEM6Q8WUY1 208 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 GIMAP1Q8WWP7 306 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 GHSRQ92847 366 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 PNPLA2Q96AD5 504 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MS4A6EQ96DS6 147 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 FAM122AQ96E09 287 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SGTBQ96EQ0 304 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MRPL48Q96GC5 212 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MSANTD3Q96H12 275 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SMIM10Q96HG1 83 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 PRAP1Q96NZ9 151 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SDF2Q99470 211 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 GSDMCQ9BYG8 508 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 RAB33BQ9H082 229 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2AG1Q9H205 316 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR52D1Q9H346 318 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ADGRL4Q9HBW9 690 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 NOX3Q9HBY0 568 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MYOZ1Q9NP98 299 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 CTPS2Q9NRF8 586 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SERINC1Q9NRX5 453 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SDHAF2Q9NX18 166 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 RDH8Q9NYR8 311 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 RPS6KB2Q9UBS0 482 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 TAC3Q9UHF0 121 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SIGLEC7Q9Y286 467 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ASF1AQ9Y294 204 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MRPS7Q9Y2R9 242 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 KLF2Q9Y5W3 355 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 DOCK6Q96HP0 2047 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 IGKV1-8A0A0C4DH67 115 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A1W2PRG6 482 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CPSF4LA6NMK7 179 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 IFITM5A6NNB3 132 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF879B4DU55 563 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 D6RAR5 112 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 J3QLW9 94 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 L7N2F9 121 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 AIPO00170 330 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CDC42EP2O14613 210 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 PIN1P1O15428 100 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 BCL2L11O43521 198 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SSNA1O43805 119 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 GMDSO60547 372 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 FCMRO60667 390 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 MTRF1O75570 445 aaKnown RBP3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 SCO1O75880 301 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 KRT33AO76009 404 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 NDUFB6O95139 128 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 HPP00738 406 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 IGF2P01344 180 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 IGKV3-15P01624 115 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 NMBP08949 121 aa3.24□□□□□ -1.89
SMCHD1-208ENST00000583344 CD3GP09693 182 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms