RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 SLC35F1Q5T1Q4 408 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 LYPD4Q6UWN0 246 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 KCTD8Q6ZWB6 473 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 C11orf42Q8N5U0 333 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 PROKR2Q8NFJ6 384 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 FOXRED1Q96CU9 486 aaPredicted RBP10.24□□□□□ -0.77
SS18-219ENST00000581570 CHID1Q9BWS9 393 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 SP140LQ9H930 580 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 PCDHGB5Q9Y5G0 923 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 MPC1Q9Y5U8 109 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 RYR2Q92736 4967 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 A0A0G2JND7 137 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 ZNF878C9JN71 531 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 GSTA4O15217 222 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 SPARCP09486 303 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 RHCEP18577 417 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 CFL1P23528 166 aaKnown RBP10.23□□□□□ -0.77
SS18-219ENST00000581570 CX3CR1P49238 355 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 RPL31P62899 125 aaKnown RBP10.23□□□□□ -0.77
SS18-219ENST00000581570 PRDX4Q13162 271 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 SNCBQ16143 134 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 SSX2Q16385 188 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 KLHL12Q53G59 568 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 FTMTQ8N4E7 242 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 OR51L1Q8NGJ5 315 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 OR52J3Q8NH60 311 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 ZNRF4Q8WWF5 429 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 MYDGFQ969H8 173 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 MALSU1Q96EH3 234 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 RNF170Q96K19 258 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 YY1AP1Q9H869 796 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 CMTM6Q9NX76 183 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 USE1Q9NZ43 259 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 NDUFAF4Q9P032 175 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 ZNF222Q9UK12 451 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 AP3M1Q9Y2T2 418 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 TBL2Q9Y4P3 447 aaKnown RBP10.23□□□□□ -0.77
SS18-219ENST00000581570 LRP12Q9Y561 859 aa10.23□□□□□ -0.77
SS18-219ENST00000581570 ZNF850A8MQ14 1090 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 ARG1P05089 322 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 CHRM2P08172 466 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 CCL3L1P16619 93 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 LMO1P25800 156 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 SLC15A1P46059 708 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 GRB2P62993 217 aaKnown RBP10.22□□□□□ -0.77
SS18-219ENST00000581570 KLF10Q13118 480 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 MAPRE2Q15555 327 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 GFOD2Q3B7J2 385 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 FAM76BQ5HYJ3 339 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 ZNF782Q6ZMW2 699 aaPredicted RBP10.22□□□□□ -0.77
SS18-219ENST00000581570 FAM57BQ71RH2 274 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 LINC00482Q8N8I6 264 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 OR4M1Q8NGD0 313 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 OR2T4Q8NH00 348 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 OR5P3Q8WZ94 311 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 PIGCQ92535 297 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 SDSLQ96GA7 329 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 ABCB9Q9NP78 766 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 COMMD3-BMI1R4GMX3 469 aa10.22□□□□□ -0.77
SS18-219ENST00000581570 EPPK1P58107 5090 aaKnown RBP10.22□□□□□ -0.77
SS18-219ENST00000581570 ZNF593O00488 134 aaPredicted RBP10.21□□□□□ -0.77
SS18-219ENST00000581570 DIRAS1O95057 198 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 HSD11B1P28845 292 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 FMO3P31513 532 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 DCTDP32321 178 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 ENTPD1P49961 510 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 DYNLT3P51808 116 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 LIPEQ05469 1076 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 KHDC1LQ5JSQ8 128 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 PRSS45Q7RTY3 260 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 THAP5Q7Z6K1 395 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 TIGD4Q8IY51 512 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 OR52H1Q8NGJ2 320 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 OR2T27Q8NH04 317 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 FAM162AQ96A26 154 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 FUZQ9BT04 418 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 FGF23Q9GZV9 251 aaPredicted RBP10.21□□□□□ -0.77
SS18-219ENST00000581570 OR10A2Q9H208 303 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 ZNF319Q9P2F9 582 aa10.21□□□□□ -0.77
SS18-219ENST00000581570 DYNC2H1Q8NCM8 4307 aaKnown RBP10.21□□□□□ -0.78
SS18-219ENST00000581570 DHRS12A0PJE2 317 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 H3BUI4 141 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 CST4P01036 141 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 APOC1P02654 83 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 CCDC159P0C7I6 412 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 OR12D2P58182 307 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 ZNF121P58317 390 aaPredicted RBP10.2□□□□□ -0.78
SS18-219ENST00000581570 DOC2BQ14184 412 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 ZNF273Q14593 569 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 KRT72Q14CN4 511 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 TEX30Q5JUR7 227 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 LDLRAD2Q5SZI1 272 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 UNQ9370/PRO34162Q6UXP9 181 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 MRPL41Q8IXM3 137 aaKnown RBP10.2□□□□□ -0.78
SS18-219ENST00000581570 SLC15A3Q8IY34 581 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 ZNF511Q8NB15 262 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 OR13D1Q8NGV5 346 aa10.2□□□□□ -0.78
SS18-219ENST00000581570 ZNF671Q8TAW3 534 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms