RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ZDHHC8Q9ULC8 765 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 LRRK2Q5S007 2527 aa9.16□□□□□ -0.94
SS18-213ENST00000579640 PQLC2LA1A4F0 135 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 TMEM210A6NLX4 147 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 IFITM5A6NNB3 132 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 M0R233 179 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 AIPO00170 330 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 MLNRO43193 412 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 ADH4P08319 380 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
SS18-213ENST00000579640 TNFSF4P23510 183 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 ZNF81P51508 661 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 CAPZA1P52907 286 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 MTCP1P56278 107 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 OR10A3P58181 314 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 GNG3P63215 75 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 TLE4Q04727 773 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 RIN1Q13671 783 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 KISS1Q15726 138 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 C1orf100Q5SVJ3 147 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 Q6ZR03 302 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 LYPD6Q86Y78 171 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 MUC15Q8N387 334 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 OR6M1Q8NGM8 313 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 TRMT10AQ8TBZ6 339 aaKnown RBP9.15□□□□□ -0.94
SS18-213ENST00000579640 KCTD12Q96CX2 325 aaKnown RBP9.15□□□□□ -0.94
SS18-213ENST00000579640 RNF170Q96K19 258 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 SORCS2Q96PQ0 1159 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 GPER1Q99527 375 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 DCUN1D5Q9BTE7 237 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 MRI1Q9BV20 369 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 CXXC4Q9H2H0 198 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 PLGRKTQ9HBL7 147 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 MSL2Q9HCI7 577 aa9.15□□□□□ -0.94
SS18-213ENST00000579640 FAM230AA0A1W2PPH8 454 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 ZSCAN5BA6NJL1 495 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 ZNF732B4DXR9 585 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 SLC17A2O00624 439 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 NCR1O76036 304 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 SNRPD2P62316 118 aaKnown RBP9.15□□□□□ -0.95
SS18-213ENST00000579640 DYNC1I2Q13409 638 aaKnown RBP9.15□□□□□ -0.95
SS18-213ENST00000579640 AGAP6Q5VW22 663 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 NR2C2APQ86WQ0 139 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 ZNF573Q86YE8 665 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 CELF2-AS1Q8N7Q2 184 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 ZNF611Q8N823 705 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 NPRL2Q8WTW4 380 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 MS4A5Q9H3V2 200 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 PPP1R3EQ9H7J1 279 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 PTTG2Q9NZH5 202 aa9.15□□□□□ -0.95
SS18-213ENST00000579640 SMIM30A4D0T7 59 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 LRP5LA4QPB2 252 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 C17orf100A8MU93 164 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 CTAG2O75638 210 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 BMP4P12644 408 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 HTR2CP28335 458 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 CD200P41217 278 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 ALDH3B1P43353 468 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 GPM6AP51674 278 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 CAV3P56539 151 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 RAB11BQ15907 218 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 MST1LQ2TV78 715 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 FAM76BQ5HYJ3 339 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 FAM166AQ6J272 317 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 OR2Z1Q8NG97 314 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 ACOT12Q8WYK0 555 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 DVL3Q92997 716 aaPredicted RBP9.14□□□□□ -0.95
SS18-213ENST00000579640 ELMOD3Q96FG2 381 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 BARHL1Q9BZE3 327 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 DYNLRB1Q9NP97 96 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 CBLN4Q9NTU7 201 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 ABRACLQ9P1F3 81 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 GHRLQ9UBU3 117 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 STEAP1Q9UHE8 339 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 DAPK2Q9UIK4 370 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 A3GALT2U3KPV4 340 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 ADGRG4Q8IZF6 3080 aa9.14□□□□□ -0.95
SS18-213ENST00000579640 H0YL77 283 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 PTBP3O95758 552 aaKnown RBP9.13□□□□□ -0.95
SS18-213ENST00000579640 CD55P08174 381 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 UBBP0CG47 229 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 THBS2P35442 1172 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 SRP9P49458 86 aaKnown RBP9.13□□□□□ -0.95
SS18-213ENST00000579640 PPOXP50336 477 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 SCAND1P57086 179 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 PCGF3Q3KNV8 242 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 FAM209AQ5JX71 171 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 IDNKQ5T6J7 187 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 HES5Q5TA89 166 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 DTX2Q86UW9 622 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 ZSCAN4Q8NAM6 433 aaPredicted RBP9.13□□□□□ -0.95
SS18-213ENST00000579640 OR10AD1Q8NGE0 317 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 PSMG3-AS1Q96PY0 264 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 SPACA5Q96QH8 159 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 PKIBQ9C010 78 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 SLIRPQ9GZT3 109 aaKnown RBP9.13□□□□□ -0.95
SS18-213ENST00000579640 FGF23Q9GZV9 251 aaPredicted RBP9.13□□□□□ -0.95
SS18-213ENST00000579640 CNTD2Q9H8S5 307 aa9.13□□□□□ -0.95
SS18-213ENST00000579640 PLEKHB1Q9UF11 243 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms