RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 MCUR1Q96AQ8 359 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CMTM5Q96DZ9 223 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PYURFQ96I23 114 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 FN3KQ9H479 309 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 HEXA-AS1Q9H8Q6 139 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RNPEPL1Q9HAU8 725 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SPAG4Q9NPE6 437 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PNRC2Q9NPJ4 139 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CYB5R1Q9UHQ9 305 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 KCNG2Q9UJ96 466 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR6C68A6NDL8 312 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 M0R135 149 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 IDH3BO43837 385 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RAMP3O60896 148 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 STUMQ69YW2 141 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 WDR82Q6UXN9 313 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 WDR86Q86TI4 376 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RNF148Q8N7C7 305 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GNPDA2Q8TDQ7 276 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ZNF799Q96GE5 643 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 LYZL4Q96KX0 146 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GAFA1Q96PS6 74 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GORASP2Q9H8Y8 452 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 HAO2Q9NYQ3 351 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 MRPL15Q9P015 296 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 N6AMT1Q9Y5N5 214 aa10.56□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PCLOQ9Y6V0 5065 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RBMY1BA6NDE4 496 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RBMY1EA6NEQ0 496 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 VGLL3A8MV65 326 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CDIPTO14735 213 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RBMY1DP0C7P1 496 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 JUNBP17275 347 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PYCR1P32322 319 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 NAA10P41227 235 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GABRA2P47869 451 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SSX2Q16385 188 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SNAI3Q3KNW1 292 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 HSP90B2PQ58FF3 399 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SLC35F1Q5T1Q4 408 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ATPAF1Q5TC12 328 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SBSPONQ8IVN8 264 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR1M1Q8NGA1 313 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR51D1Q8NGF3 324 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 C12orf43Q96C57 262 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 MED30Q96HR3 178 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 MYLK2Q9H1R3 596 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 WDR13Q9H1Z4 485 aa10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 MRPL22Q9NWU5 206 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RHBDL1O75783 438 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 FABP3P05413 133 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ANOS1P23352 680 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CHATP28329 748 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PRDX6P30041 224 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RRM2P31350 389 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ECI1P42126 302 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GSSP48637 474 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 THBS3P49746 956 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RAB25P57735 213 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 TSPAN31Q12999 210 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 TAF13Q15543 124 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GLYATL3Q5SZD4 288 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 DRAM2Q6UX65 266 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ZNF788Q6ZQV5 615 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PROKR2Q8NFJ6 384 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR52L1Q8NGH7 329 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR56B2PQ8NGI1 322 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR4C15Q8NGM1 316 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR2T4Q8NH00 348 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 COPS4Q9BT78 406 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 MAGEL2Q9UJ55 1249 aa10.54□□□□□ -0.72
CDK5RAP3-213ENST00000579605 TVP23AA6NH52 213 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SEMG1P04279 462 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 LPLP06858 475 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RPS27P42677 84 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CEBPDP49716 269 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 LUMP51884 338 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CAPZA1P52907 286 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ZNF782Q6ZMW2 699 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PIGWQ7Z7B1 504 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CYB561A3Q8NBI2 242 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ZNRF1Q8ND25 227 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 TMEM185AQ8NFB2 350 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR52H1Q8NGJ2 320 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 NSMCE2Q96MF7 247 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 EGLN3Q9H6Z9 239 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PPP1R3EQ9H7J1 279 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 C19orf12Q9NSK7 152 aa10.53□□□□□ -0.72
CDK5RAP3-213ENST00000579605 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SH2D7A6NKC9 451 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 NUDT19A8MXV4 375 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 SIGLEC5O15389 551 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 AKR7A2O43488 359 aa10.52□□□□□ -0.73
CDK5RAP3-213ENST00000579605 ARG1P05089 322 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms