RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 RIN1Q13671 783 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 FAM189A2Q15884 450 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 GSG1Q2KHT4 349 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 STEAP3Q658P3 488 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 LYSMD2Q8IV50 215 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 CDH26Q8IXH8 852 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 PNLDC1Q8NA58 520 aaKnown RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 DNAAF1Q8NEP3 725 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 SEMA6DQ8NFY4 1073 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 OR4M1Q8NGD0 313 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 OR1K1Q8NGR3 316 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 OR1J2Q8NGS2 313 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 OR13C9Q8NGT0 318 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 LILRB1Q8NHL6 650 aaPredicted RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 ITFG2Q969R8 447 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 FBXW5Q969U6 566 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 UQCC2Q9BRT2 126 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 DIABLOQ9NR28 239 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 C14orf119Q9NWQ9 140 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 SONP18583 2426 aaKnown RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 ZANQ9Y493 2812 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 LOC100289279A0A1B0GTE1 492 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 OVOL3O00110 214 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 SSX4O60224 188 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 TPPPO94811 219 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 F12P00748 615 aaPredicted RBP8.75□□□□□ -1.01
SS18-207ENST00000577636 HLA-HP01893 362 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 SERPINA5P05154 406 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 CD3EP07766 207 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 HCKP08631 526 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 DBHP09172 617 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 PATE4P0C8F1 98 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 CCNOP22674 350 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 MAP2K3P46734 347 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 MRPS10P82664 201 aaKnown RBP8.75□□□□□ -1.01
SS18-207ENST00000577636 RIPPLY1Q0D2K3 151 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 P2RY14Q15391 338 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 CNN3Q15417 329 aaKnown RBP8.75□□□□□ -1.01
SS18-207ENST00000577636 KRTAP24-1Q3LI83 254 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 TMEM69Q5SWH9 247 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 GLYATL3Q5SZD4 288 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 HACD4Q5VWC8 232 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 MZT2BQ6NZ67 158 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 TFAP2EQ6VUC0 442 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 Q6ZT83 130 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 BEND4Q6ZU67 534 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 CENPSQ8N2Z9 138 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 FTMTQ8N4E7 242 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 SYNPRQ8TBG9 265 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 SLC7A6Q92536 515 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 FAM3DQ96BQ1 224 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 S100PBPQ96BU1 408 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 REEP6Q96HR9 211 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 GPER1Q99527 375 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 S100A13Q99584 98 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 GFI1Q99684 422 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 TMEM204Q9BSN7 226 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 BEX2Q9BXY8 128 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 ABCG5Q9H222 651 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 OPA3Q9H6K4 179 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 METTL17Q9H7H0 456 aaPredicted RBP8.75□□□□□ -1.01
SS18-207ENST00000577636 PPP1R3EQ9H7J1 279 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 RHBDL2Q9NX52 303 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 OR5V1Q9UGF6 321 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 PIGLQ9Y2B2 252 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 MRPS7Q9Y2R9 242 aaKnown RBP8.75□□□□□ -1.01
SS18-207ENST00000577636 RNF115Q9Y4L5 304 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 V9GYS6 101 aa8.75□□□□□ -1.01
SS18-207ENST00000577636 ABCA1O95477 2261 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 RAI1Q7Z5J4 1906 aaPredicted RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 A0A0G2JMP0 313 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 A0A0X1KG70 313 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 C5orf49A4QMS7 147 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 METTL21EPA6NDL7 271 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 CENPXA8MT69 81 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 SCGNO76038 276 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 IGHV4-39P01824 125 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 FAM157CP0CG43 387 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 UBBP0CG47 229 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 STOMP27105 288 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 ZNF93P35789 620 aaPredicted RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 CLDN12P56749 244 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 P2RY6Q15077 328 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 GUSBP1Q15486 140 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 ZNF79Q15937 498 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 TBC1D28Q2M2D7 210 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 TBRG1Q3YBR2 411 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 HIKESHIQ53FT3 197 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 C1orf100Q5SVJ3 147 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 SFRP5Q5T4F7 317 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 ZNF57Q68EA5 555 aaPredicted RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 UNQ6126/PRO20091Q6UXV3 157 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 UTS2BQ765I0 119 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 PRSS45Q7RTY3 260 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 SNX29P2Q8IUI4 249 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 C1orf162Q8NEQ5 155 aaPredicted RBP8.74□□□□□ -1.01
SS18-207ENST00000577636 OR4M2Q8NGB6 313 aa8.74□□□□□ -1.01
SS18-207ENST00000577636 OR51D1Q8NGF3 324 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms