RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TTRP02766 147 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 GSTP1P09211 210 aaKnown RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 IFI6P09912 130 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 APOBEC1P41238 236 aaKnown RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 SEC13P55735 322 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 ACY1Q03154 408 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 C2orf27AQ580R0 203 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 CNKSR3Q6P9H4 555 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 ZNF321PQ8N8H1 164 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 OR5D14Q8NGL3 314 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 ELSPBP1Q96BH3 223 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 RBM14Q96PK6 669 aaKnown RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 ADOQ96SZ5 270 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 TXNIPQ9H3M7 391 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMG6-215ENST00000574501 ANAPC10Q9UM13 185 aa12.73□□□□□ -0.37
SMG6-215ENST00000574501 C14orf166Q9Y224 244 aaKnown RBP12.73□□□□□ -0.37
SMG6-215ENST00000574501 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 MBPP02686 304 aaPredicted RBP12.72□□□□□ -0.37
SMG6-215ENST00000574501 TRGC1P0CF51 173 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 RPS21P63220 83 aaKnown RBP12.72□□□□□ -0.37
SMG6-215ENST00000574501 DLK1P80370 383 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 FOXK1P85037 733 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 NHLH2Q02577 135 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 WDFY1Q8IWB7 410 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 METTL27Q8N6F8 245 aaPredicted RBP12.72□□□□□ -0.37
SMG6-215ENST00000574501 EMG1Q92979 244 aaKnown RBP12.72□□□□□ -0.37
SMG6-215ENST00000574501 GINS3Q9BRX5 216 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 ABHD14AQ9BUJ0 271 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 TMEM59Q9BXS4 323 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 FAM60AQ9NP50 221 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 TUBD1Q9UJT1 453 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 SRPK3Q9UPE1 567 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 SLCO1B1Q9Y6L6 691 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 IGKV1D-43A0A0B4J1Z2 117 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 ZNF724A8MTY0 619 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 RPL36A-HNRNPH2H7BZ11 118 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 PHOX2AO14813 284 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 P2RY1P47900 373 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 RGS19P49795 217 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 ZNF117Q03924 483 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 SP6Q3SY56 376 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 CDCP2Q5VXM1 449 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 ZNF385CQ66K41 422 aaPredicted RBP12.72□□□□□ -0.37
SMG6-215ENST00000574501 WDR92Q96MX6 357 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 NEU1Q99519 415 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 C2orf88Q9BSF0 95 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 PLEKHA2Q9HB19 425 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
SMG6-215ENST00000574501 IFNA10P01566 189 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 IFNA21P01568 189 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 LMO1P25800 156 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 HSD11B2P80365 405 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 SGCBQ16585 318 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 COMMD2Q86X83 199 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 SLC26A10Q8NG04 563 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 OR51E1Q8TCB6 317 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 GPBAR1Q8TDU6 330 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 ABHD5Q8WTS1 349 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 HPSE2Q8WWQ2 592 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 FRZBQ92765 325 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 MVB12AQ96EY5 273 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.37
SMG6-215ENST00000574501 PBOV1Q9GZY1 135 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 BCO1Q9HAY6 547 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 PRTFDC1Q9NRG1 225 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 FAM206AQ9NX38 181 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 THAP10Q9P2Z0 257 aaPredicted RBP12.71□□□□□ -0.37
SMG6-215ENST00000574501 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.37
SMG6-215ENST00000574501 RBFOX3A6NFN3 312 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 CDRT15L2A8MXV6 281 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 GIMD1P0DJR0 217 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 GLI4P10075 376 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 SLC2A1P11166 492 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 IL11P20809 199 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 IL2RGP31785 369 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 AFF3P51826 1226 aaKnown RBP12.71□□□□□ -0.38
SMG6-215ENST00000574501 OR8G1Q15617 311 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 RHBDD1Q8TEB9 315 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 REEP6Q96HR9 211 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 C1orf147Q96MC9 270 aaPredicted RBP12.71□□□□□ -0.38
SMG6-215ENST00000574501 HRASLS2Q9NWW9 162 aa12.71□□□□□ -0.38
SMG6-215ENST00000574501 HSD17B6O14756 317 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 PTBP3O95758 552 aaKnown RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 ZNF20P17024 532 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 HIKESHIQ53FT3 197 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 AKR1C8PQ5T2L2 129 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 SGPP2Q8IWX5 399 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 OR5D18Q8NGL1 313 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 TMEM68Q96MH6 324 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 NUDT16L1Q9BRJ7 211 aaKnown RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 NXF5Q9H1B4 397 aaKnown RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 STRAPQ9Y3F4 350 aaKnown RBP12.7□□□□□ -0.38
SMG6-215ENST00000574501 CLDN16Q9Y5I7 305 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 IGKV1D-8A0A087WSZ0 117 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 CDC14CA4D256 554 aa12.7□□□□□ -0.38
SMG6-215ENST00000574501 ZNF878C9JN71 531 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms