RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 OR10Z1Q8NGY1 313 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 C8orf46Q8TAG6 207 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 SSMEM1Q8WWF3 244 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 RTL8AQ9BWD3 113 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 YIPF3Q9GZM5 350 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 FAM53CQ9NYF3 392 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 TVP23BQ9NYZ1 205 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 ONECUT1Q9UBC0 465 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 ZNF391Q9UJN7 358 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 POMT1Q9Y6A1 747 aa14.86□□□□□ -0.03
CHD3-214ENST00000572579 WNK1Q9H4A3 2382 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 PRKDCP78527 4128 aaKnown RBP14.85□□□□□ -0.03
CHD3-214ENST00000572579 IGKV1D-17A0A075B6S4 117 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 ANXA2P2A6NMY6 339 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 NDUFB3O43676 98 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 GPR137BO60478 399 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 MITFO75030 526 aaPredicted RBP14.85□□□□□ -0.03
CHD3-214ENST00000572579 SRSF10O75494 262 aaKnown RBP14.85□□□□□ -0.03
CHD3-214ENST00000572579 CRISP1P54107 249 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 ROM1Q03395 351 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 MFGE8Q08431 387 aaPredicted RBP14.85□□□□□ -0.03
CHD3-214ENST00000572579 KLRD1Q13241 179 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 FLOT2Q14254 428 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 SNAPC1Q16533 368 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 TAF9Q16594 264 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 CEP78Q5JTW2 689 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 HCP5Q6MZN7 132 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 SLC36A1Q7Z2H8 476 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 TTTY10Q9BZA0 68 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 ZNF556Q9HAH1 456 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 ELL3Q9HB65 397 aaPredicted RBP14.85□□□□□ -0.03
CHD3-214ENST00000572579 LAMP5Q9UJQ1 280 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 ZNF222Q9UK12 451 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 MAB21L2Q9Y586 359 aa14.85□□□□□ -0.03
CHD3-214ENST00000572579 A0A0U1RQV5 110 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 TMEM269A0A1B0GVZ9 245 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 A0A1W2PRD5 423 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 A0A1W2PRF3 423 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 A0A1W2PRM7 423 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 CLPSL1A2RUU4 121 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 TMEM210A6NLX4 147 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 ZNF732B4DXR9 585 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 SIGLEC5O15389 551 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 GYG2O15488 501 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 ACAA1P09110 424 aaPredicted RBP14.84□□□□□ -0.03
CHD3-214ENST00000572579 RPS7P62081 194 aaKnown RBP14.84□□□□□ -0.03
CHD3-214ENST00000572579 PTGES3Q15185 160 aaKnown RBP14.84□□□□□ -0.03
CHD3-214ENST00000572579 OLFML2AQ68BL7 652 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 METAP1DQ6UB28 335 aaPredicted RBP14.84□□□□□ -0.03
CHD3-214ENST00000572579 KCTD8Q6ZWB6 473 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 KRT77Q7Z794 578 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 ZDHHC23Q8IYP9 409 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 OR4F5Q8NH21 305 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 LINC01006Q8NI28 216 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 C17orf50Q8WW18 174 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 AJUBAQ96IF1 538 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 CITED1Q99966 193 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 PBOV1Q9GZY1 135 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 NIPAL2Q9H841 368 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 BEX1Q9HBH7 125 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 KIF17Q9P2E2 1029 aa14.84□□□□□ -0.03
CHD3-214ENST00000572579 ZNF816-ZNF321PA0A0X1KG74 233 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 A0A1B0GVI7 797 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 KNG1P01042 644 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 PSG2P11465 335 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 CEACAM21Q3KPI0 293 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 DEGS2Q6QHC5 323 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 ZNRF1Q8ND25 227 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 TBC1D15Q8TC07 691 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 OR51E1Q8TCB6 317 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 DYRK2Q92630 601 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 DMRTB1Q96MA1 342 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 OR8B4Q96RC9 309 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 CADM1Q9BY67 442 aaKnown RBP14.83□□□□□ -0.04
CHD3-214ENST00000572579 DNTTIP1Q9H147 329 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 GPR84Q9NQS5 396 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 PAPOLBQ9NRJ5 636 aaKnown RBP14.83□□□□□ -0.04
CHD3-214ENST00000572579 NLKQ9UBE8 527 aa14.83□□□□□ -0.04
CHD3-214ENST00000572579 ACOD1A6NK06 481 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 OR2AT4A6NND4 320 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 GPR37O15354 613 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 GSC2O15499 205 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 CRYBA1P05813 215 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 FAHP16930 419 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 SNCBQ16143 134 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 LRRC10Q5BKY1 277 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 AADACL4Q5VUY2 407 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 ZNF679Q8IYX0 411 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 FTMTQ8N4E7 242 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 AQP3Q92482 292 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 H1FXQ92522 213 aaKnown RBP14.82□□□□□ -0.04
CHD3-214ENST00000572579 NRBF2Q96F24 287 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 ZNF488Q96MN9 340 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 APOL4Q9BPW4 351 aa14.82□□□□□ -0.04
CHD3-214ENST00000572579 SLC25A10Q9UBX3 287 aaPredicted RBP14.82□□□□□ -0.04
CHD3-214ENST00000572579 A0A1B0GTI1 187 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 A0A1B0GUS0 222 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 NPFFO15130 113 aa14.81□□□□□ -0.04
CHD3-214ENST00000572579 DNAJC8O75937 253 aaPredicted RBP14.81□□□□□ -0.04
CHD3-214ENST00000572579 TTRP02766 147 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms