RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 HDGFL3Q9Y3E1 203 aa14.28□□□□□ -0.12
RAB40B-206ENST00000571995 PMS2P2O95744 297 aa14.27□□□□□ -0.12
RAB40B-206ENST00000571995 NME2P22392 152 aa14.27□□□□□ -0.12
RAB40B-206ENST00000571995 MEF2DQ14814 521 aa14.27□□□□□ -0.12
RAB40B-206ENST00000571995 B3GNT2Q9NY97 397 aa14.27□□□□□ -0.12
RAB40B-206ENST00000571995 ZNF629Q9UEG4 869 aaPredicted RBP14.27□□□□□ -0.12
RAB40B-206ENST00000571995 CYB5R1Q9UHQ9 305 aa14.27□□□□□ -0.12
RAB40B-206ENST00000571995 UBE2J1Q9Y385 318 aaPredicted RBP14.27□□□□□ -0.12
RAB40B-206ENST00000571995 TO15178 435 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 GRPP07492 148 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 DSCR4P56555 118 aaPredicted RBP14.27□□□□□ -0.13
RAB40B-206ENST00000571995 DOK3Q7L591 496 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 ANGPTL6Q8NI99 470 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 CPT1CQ8TCG5 803 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 FOXB1Q99853 325 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 PCED1AQ9H1Q7 454 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 CBX5P45973 191 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 CAMK2BQ13554 666 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 OR1C1Q15619 314 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 ELFN2Q5R3F8 820 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 PHYHD1Q5SRE7 291 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 PGAP1Q75T13 922 aa14.27□□□□□ -0.13
RAB40B-206ENST00000571995 NFAM1Q8NET5 270 aaPredicted RBP14.27□□□□□ -0.13
RAB40B-206ENST00000571995 INTS1Q8N201 2190 aaKnown RBP14.27□□□□□ -0.13
RAB40B-206ENST00000571995 TUSC5Q8IXB3 177 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 DEFB124Q8NES8 71 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 GPX8Q8TED1 209 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 SLC25A21Q9BQT8 299 aaPredicted RBP14.26□□□□□ -0.13
RAB40B-206ENST00000571995 NPIPB7O75200 414 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 ANOS1P23352 680 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 ARF1P84077 181 aaKnown RBP14.26□□□□□ -0.13
RAB40B-206ENST00000571995 RIPPLY1Q0D2K3 151 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 IAH1Q2TAA2 248 aaPredicted RBP14.26□□□□□ -0.13
RAB40B-206ENST00000571995 ALKBH6Q3KRA9 238 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 BEND4Q6ZU67 534 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 RAB27BO00194 218 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 HAAOP46952 286 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 PCOLCEQ15113 449 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 MICBQ29980 383 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 PABPC1L2AQ5JQF8 200 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 OR10S1Q8NGN2 331 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 C17orf50Q8WW18 174 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 TSNAXQ99598 290 aaKnown RBP14.26□□□□□ -0.13
RAB40B-206ENST00000571995 SRXN1Q9BYN0 137 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 METTL9Q9H1A3 318 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 B3GAT1Q9P2W7 334 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 ZGRF1Q86YA3 2104 aa14.26□□□□□ -0.13
RAB40B-206ENST00000571995 NRASP01111 189 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 ICAM2P13598 275 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 GPM6AP51674 278 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 MALLQ13021 153 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 UNC119Q13432 240 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 NELFAQ9H3P2 528 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 PTTG3PQ9NZH4 202 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 ST3GAL6Q9Y274 331 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 LNP1A1A4G5 178 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 PGA4P0DJD7 388 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 PGA3P0DJD8 388 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 PTGFRP43088 359 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 UBE2NP61088 152 aaKnown RBP14.25□□□□□ -0.13
RAB40B-206ENST00000571995 PPIAP62937 165 aaKnown RBP14.25□□□□□ -0.13
RAB40B-206ENST00000571995 HES3Q5TGS1 186 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 TMEM88Q6PEY1 159 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 FBXW12Q6X9E4 464 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 GPR27Q9NS67 375 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 KCNIP3Q9Y2W7 256 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 CDC14BO60729 498 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 MMP16P51512 607 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 AANATQ16613 207 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 PIGYQ3MUY2 71 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 NAXDQ8IW45 347 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 TMEM217Q8N7C4 229 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 LINC00052Q96N35 136 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 C12orf10Q9HB07 376 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 DUSP13Q9UII6 198 aa14.25□□□□□ -0.13
RAB40B-206ENST00000571995 IGHV3-13P01766 116 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 IGHV3-7P01780 117 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 UMODP07911 640 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 LIFP15018 202 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 ROM1Q03395 351 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 CLINT1Q14677 625 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 OR2B11Q5JQS5 317 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 HAGHLQ6PII5 290 aaPredicted RBP14.24□□□□□ -0.13
RAB40B-206ENST00000571995 SLC22A25Q6T423 547 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 C17orf82Q86X59 251 aaPredicted RBP14.24□□□□□ -0.13
RAB40B-206ENST00000571995 SGPP2Q8IWX5 399 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 HGDQ93099 445 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 RAB33BQ9H082 229 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 FAM206AQ9NX38 181 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 WDFY3Q8IZQ1 3526 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 CTDSPLO15194 276 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 CPT2P23786 658 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 GRB2P62993 217 aaKnown RBP14.24□□□□□ -0.13
RAB40B-206ENST00000571995 OR51H1Q8NH63 302 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 ZNF488Q96MN9 340 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 MAGT1Q9H0U3 335 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.24□□□□□ -0.13
RAB40B-206ENST00000571995 IGHV1-45A0A0A0MS14 117 aa14.24□□□□□ -0.13
RAB40B-206ENST00000571995 TMEM200CA6NKL6 621 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms