RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IL5RAQ01344 420 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 KIR3DS1Q14943 382 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 RBMY1FQ15415 496 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 ZNF404Q494X3 552 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 FAM201AQ5SY85 155 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 SLX4IPQ5VYV7 408 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 C12orf73Q69YU5 71 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 H1FNTQ75WM6 255 aaPredicted RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 PRSS48Q7RTY5 328 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 VMO1Q7Z5L0 202 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 HMGN2P46Q86SG4 172 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 PEX5LQ8IYB4 626 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 PNLDC1Q8NA58 520 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 AQP11Q8NBQ7 271 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OR2Z1Q8NG97 314 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OR9Q2Q8NGE9 314 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OR8H1Q8NGG4 311 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OR52P1PQ8NH57 321 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OR52J3Q8NH60 311 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 CNIH3Q8TBE1 160 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 NPRL2Q8WTW4 380 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 TRUB1Q8WWH5 349 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 SLC25A36Q96CQ1 311 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OXGR1Q96P68 337 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 SSX3Q99909 188 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 BCL7BQ9BQE9 202 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 MCRIP2Q9BUT9 160 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 FNDC11Q9BVV2 318 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 OR2J1Q9GZK6 312 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 C1orf198Q9H425 327 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 VCX3AQ9NNX9 186 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 RAB18Q9NP72 206 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 B3GAT2Q9NPZ5 323 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 PAK1IP1Q9NWT1 392 aaPredicted RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 MRPL15Q9P015 296 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 B3GAT1Q9P2W7 334 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 RSL24D1Q9UHA3 163 aaKnown RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 PSORS1C1Q9UIG5 152 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 ZNF443Q9Y2A4 671 aaPredicted RBP5.58□□□□□ -1.52
CHD3-213ENST00000571249 WDR45Q9Y484 360 aa5.58□□□□□ -1.52
CHD3-213ENST00000571249 TCRBV4S1A1TA0A5B7 111 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 CDHR4A6H8M9 788 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 CLDN24A6NM45 220 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 VGLL3A8MV65 326 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 A8MVM7 634 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 PRR23D1E9PI22 279 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 NPFFO15130 113 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 AKAP8O43823 692 aaKnown RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 CHST1O43916 411 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 TIMM8AO60220 97 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 LYPD3O95274 346 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 PRR23D2P0DMB1 279 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 PIPP12273 146 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 EEF1B2P24534 225 aaKnown RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 IFNGR2P38484 337 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 SLC15A1P46059 708 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 GSSP48637 474 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 UGT2B15P54855 530 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 CDC42P60953 191 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 HPCAP84074 193 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 ST3GAL3Q11203 375 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 IRF3Q14653 427 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 TRAM2Q15035 370 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 PTGES3Q15185 160 aaKnown RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 SYT6Q5T7P8 510 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 C1orf140Q5VVS0 124 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 RNLSQ5VYX0 342 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 TMEM53Q6P2H8 277 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 PLBD1Q6P4A8 553 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 CRIP3Q6Q6R5 217 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 ZNF836Q6ZNA1 936 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 ZER1Q7Z7L7 766 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 ERI1Q8IV48 349 aaKnown RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 CLIP4Q8N3C7 705 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 PNKDQ8N490 385 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 SVOPQ8N4V2 548 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 CLDN22Q8N7P3 220 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 OR5AU1Q8NGC0 362 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 OR4K5Q8NGD3 323 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 VANGL1Q8TAA9 524 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 ACOT11Q8WXI4 607 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 CNOT9Q92600 299 aaKnown RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 SLC38A4Q969I6 547 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 SH3GL3Q99963 347 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 EMC6Q9BV81 110 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 ULBP2Q9BZM5 246 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 SLC25A19Q9HC21 320 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 GCM1Q9NP62 436 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 EXOSC3Q9NQT5 275 aaKnown RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 CNOT2Q9NZN8 540 aaKnown RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 TSSC4Q9Y5U2 329 aaPredicted RBP5.57□□□□□ -1.52
CHD3-213ENST00000571249 SMAD5-AS1Q9Y6J3 95 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 MYCBP2O75592 4640 aa5.57□□□□□ -1.52
CHD3-213ENST00000571249 A0A087WUU8 490 aa5.56□□□□□ -1.52
CHD3-213ENST00000571249 IQCMA0A1B0GVH7 501 aa5.56□□□□□ -1.52
CHD3-213ENST00000571249 MEIOCA2RUB1 952 aa5.56□□□□□ -1.52
CHD3-213ENST00000571249 FAM90A18PA6NE21 464 aa5.56□□□□□ -1.52
CHD3-213ENST00000571249 FAM90A16PA6NEW6 464 aa5.56□□□□□ -1.52
CHD3-213ENST00000571249 FAM90A9PA6NNJ1 464 aa5.56□□□□□ -1.52
CHD3-213ENST00000571249 FAM90A5PA8MXJ8 464 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms