RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 TSSC4Q9Y5U2 329 aaPredicted RBP8.98□□□□□ -0.97
VPS53-207ENST00000570510 A0A1B0GW55 424 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 NKX6-3A6NJ46 265 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 GNGT2O14610 69 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 SLC16A7O60669 478 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 FKBP6O75344 327 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 GASTP01350 101 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 HMGN1P05114 100 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4L2P0CJ85 424 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4L3P0CJ86 424 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4L4P0CJ87 422 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4L5P0CJ88 424 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4L6P0CJ89 424 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4L7P0CJ90 424 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 CTLA4P16410 223 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 NDUFB7P17568 137 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 PAX6P26367 422 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 CDKN2AP42771 156 aaKnown RBP8.97□□□□□ -0.97
VPS53-207ENST00000570510 HIST1H3AP68431 136 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 CD83Q01151 205 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 PLA1AQ53H76 456 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 TEX30Q5JUR7 227 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 HIST2H3PS2Q5TEC6 136 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 TEX36Q5VZQ5 186 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 KCTD18Q6PI47 426 aaPredicted RBP8.97□□□□□ -0.97
VPS53-207ENST00000570510 CRIP3Q6Q6R5 217 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4L9Q6RFH8 374 aaPredicted RBP8.97□□□□□ -0.97
VPS53-207ENST00000570510 COLCA1Q6ZS62 124 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 HIST2H3AQ71DI3 136 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 SPATA24Q86W54 205 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 Q8N2B8 174 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 AQP11Q8NBQ7 271 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 OR10G2Q8NGC3 310 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 LRRC29Q8WV35 223 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 TNFRSF14Q92956 283 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 PITX2Q99697 317 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 ASCL2Q99929 193 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 NUAK2Q9H093 628 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 DUX4Q9UBX2 424 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 B9D1Q9UPM9 204 aa8.97□□□□□ -0.97
VPS53-207ENST00000570510 COA3Q9Y2R0 106 aaPredicted RBP8.97□□□□□ -0.97
VPS53-207ENST00000570510 IGLV1-36A0A0B4J1U3 117 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 CD300LBA8K4G0 201 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 SOCS2O14508 198 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 FCN3O75636 299 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 HIST1H1CP16403 213 aaKnown RBP8.96□□□□□ -0.98
VPS53-207ENST00000570510 NAA10P41227 235 aaPredicted RBP8.96□□□□□ -0.98
VPS53-207ENST00000570510 GMFBP60983 142 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 CBX1P83916 185 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 DGCR2P98153 550 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 PCK2Q16822 640 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 PTCHD4Q6ZW05 846 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 ASRGL1Q7L266 308 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 TMEM219Q86XT9 240 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 SLC26A10Q8NG04 563 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 OR4X2Q8NGF9 303 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 TEX47Q8TBZ9 253 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 RPS4Y2Q8TD47 263 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 MED30Q96HR3 178 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 MAP6Q96JE9 813 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 PRRG3Q9BZD7 231 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 HEXA-AS1Q9H8Q6 139 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 CMC2Q9NRP2 79 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 INPP5EQ9NRR6 644 aa8.96□□□□□ -0.98
VPS53-207ENST00000570510 SLC25A10Q9UBX3 287 aaPredicted RBP8.96□□□□□ -0.98
VPS53-207ENST00000570510 DNAH9Q9NYC9 4486 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 MEGF11A6BM72 1044 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 RIIAD1A6NNX1 92 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 EBAG9O00559 213 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 SYNGR1O43759 233 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 E2F6O75461 281 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 CIB2O75838 187 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 PTBP3O95758 552 aaKnown RBP8.95□□□□□ -0.98
VPS53-207ENST00000570510 LHBP01229 141 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 OSMP13725 252 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 ZNF3P17036 446 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 FASP25445 335 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 TPTEP56180 551 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 ESRRGP62508 458 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 ZFP1Q6P2D0 407 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 DPY19L4Q7Z388 723 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 OR6V1Q8N148 313 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 OR9Q2Q8NGE9 314 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 OR51D1Q8NGF3 324 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 OR5T2Q8NGG2 359 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 OR2AJ1Q8NGZ0 328 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 TFAP2CQ92754 450 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 UTP4Q969X6 686 aaKnown RBP8.95□□□□□ -0.98
VPS53-207ENST00000570510 C12orf43Q96C57 262 aaKnown RBP8.95□□□□□ -0.98
VPS53-207ENST00000570510 NMNAT3Q96T66 252 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 FEVQ99581 238 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 TSSK6Q9BXA6 273 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 NMNAT2Q9BZQ4 307 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 WNT10AQ9GZT5 417 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 RNPEPL1Q9HAU8 725 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 TBC1D23Q9NUY8 699 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 MRPL15Q9P015 296 aaKnown RBP8.95□□□□□ -0.98
VPS53-207ENST00000570510 CYB5R1Q9UHQ9 305 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 ZNF391Q9UJN7 358 aa8.95□□□□□ -0.98
VPS53-207ENST00000570510 hCG_1809904A0A1W2PP81 198 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms