RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 CCL3L1P16619 93 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 JUNBP17275 347 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-220ENST00000569827 GLRA1P23415 457 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 IFNGR2P38484 337 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 GPM6AP51674 278 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 LOXL3P58215 753 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 ACSM1Q08AH1 577 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 CEP78Q5JTW2 689 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 C11orf87Q6NUJ2 197 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF782Q6ZMW2 699 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-220ENST00000569827 Q6ZS46 218 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 LHFPL4Q7Z7J7 247 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 TMEM219Q86XT9 240 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 DYNAPQ8N1N2 210 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 OR5P3Q8WZ94 311 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 MCUR1Q96AQ8 359 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 PHF21AQ96BD5 680 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 R3HDM4Q96D70 268 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 RNF170Q96K19 258 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 NSMCE2Q96MF7 247 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF488Q96MN9 340 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 OR10A2Q9H208 303 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 YY1AP1Q9H869 796 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF702PQ9H963 129 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 VNN3Q9NY84 501 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 NLKQ9UBE8 527 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 KLHDC2Q9Y2U9 406 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 SF3B6Q9Y3B4 125 aaKnown RBP9.79□□□□□ -0.84
CAPN3-220ENST00000569827 LYVE1Q9Y5Y7 322 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 A0A1W2PRX2 142 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 ADARB2-AS1A8MUL3 147 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 SELENOFO60613 162 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 CCDC22O60826 627 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 MPIG6BO95866 241 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 PSG2P11465 335 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 SLC15A1P46059 708 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 BLMHQ13867 455 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 AQP11Q8NBQ7 271 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 OR4M1Q8NGD0 313 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 OR8B12Q8NGG6 310 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 OR10Z1Q8NGY1 313 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 PIFOQ8TCI5 191 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 RNF133Q8WVZ7 376 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 INTS14Q96SY0 518 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 CITED2Q99967 270 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-220ENST00000569827 GORASP2Q9H8Y8 452 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 SERTAD4Q9NUC0 356 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 NECAP2Q9NVZ3 263 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 IL20Q9NYY1 176 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF222Q9UK12 451 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 U3KQV3 271 aa9.78□□□□□ -0.84
CAPN3-220ENST00000569827 TNFRSF11BO00300 401 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 NDUFAB1O14561 156 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 H2BFMP0C1H6 154 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 PIPP12273 146 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-220ENST00000569827 GSTT1P30711 240 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 DCTDP32321 178 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 OPRL1P41146 370 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 SLC25A1P53007 311 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 CAV3P56539 151 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 IL5RAQ01344 420 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 TEX30Q5JUR7 227 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 FOXB2Q5VYV0 432 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 ZNF770Q6IQ21 691 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-220ENST00000569827 CCBE1Q6UXH8 406 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-220ENST00000569827 CYP2R1Q6VVX0 501 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 RASSF6Q6ZTQ3 369 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 REC114Q7Z4M0 266 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 TIGD4Q8IY51 512 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 ZDHHC23Q8IYP9 409 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 CSNK2A3Q8NEV1 391 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 MED30Q96HR3 178 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 TTTY10Q9BZA0 68 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 NPFFR1Q9GZQ6 430 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 DNTTIP1Q9H147 329 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 RANBP3Q9H6Z4 567 aaPredicted RBP9.77□□□□□ -0.85
CAPN3-220ENST00000569827 IL1RAPQ9NPH3 570 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 MAGEL2Q9UJ55 1249 aa9.77□□□□□ -0.85
CAPN3-220ENST00000569827 TMEM210A6NLX4 147 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 ZNF732B4DXR9 585 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 PSMD9O00233 223 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 IGLL1P15814 213 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 ATP6V1B2P21281 511 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 HCCSP53701 268 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 ZNF273Q14593 569 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 LDLRAD2Q5SZI1 272 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 RPL13AP3Q6NVV1 102 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 CD177Q8N6Q3 437 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 OR52H1Q8NGJ2 320 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 OR5D13Q8NGL4 314 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 THEM6Q8WUY1 208 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 PPP1R14AQ96A00 147 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 FAM234AQ9H0X4 552 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 MYLK2Q9H1R3 596 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 MEGF9Q9H1U4 602 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 OR51V1Q9H2C8 321 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 CD300AQ9UGN4 299 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 MPC1Q9Y5U8 109 aa9.76□□□□□ -0.85
CAPN3-220ENST00000569827 RFPL4AA6NLU0 287 aa9.75□□□□□ -0.85
CAPN3-220ENST00000569827 RIIAD1A6NNX1 92 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms