RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 TMEM80Q96HE8 168 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 RTL8AQ9BWD3 113 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 C1orf123Q9NWV4 160 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 CNOT2Q9NZN8 540 aaKnown RBP11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 MIOXQ9UGB7 285 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 PSORS1C1Q9UIG5 152 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 ENPP5Q9UJA9 477 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 EXOSC1Q9Y3B2 195 aaKnown RBP11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 CUBNO60494 3623 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 MXRA5Q9NR99 2828 aa11.59□□□□□ -0.55
HERPUD1-210ENST00000565966 A0A0G2JMP0 313 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 A0A0X1KG70 313 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 LOC107986453A0A1B0GWG9 222 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 EFCAB10A6NFE3 127 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 A6NLC8 198 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 CEACAM18A8MTB9 384 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 F5H0A9 414 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 H3BSH0 61 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 SYT7O43581 403 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 WNT2P09544 360 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 UBCP0CG48 685 aaKnown RBP11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 PIPP12273 146 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 GATA3P23771 443 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 THBS2P35442 1172 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 ST3GAL4Q11206 333 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 ALKBH1Q13686 389 aaKnown RBP11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 ZNF404Q494X3 552 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 C6orf141Q5SZD1 244 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 TMEM244Q5VVB8 128 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 TMEM42Q69YG0 159 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 FAHD2BQ6P2I3 314 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 ZNF826PQ6ZT77 177 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 MOB3CQ70IA8 216 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 CCDC54Q8NEL0 328 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 OR4M2Q8NGB6 313 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 FAHD2AQ96GK7 314 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 RNF170Q96K19 258 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 HIST1H2AAQ96QV6 131 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 TMEM246Q9BRR3 403 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 ANKRD60Q9BZ19 345 aa11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 CAB39Q9Y376 341 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-210ENST00000565966 PPIAL4CA0A0B4J2A2 164 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 A6NIN4 97 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 TMEM210A6NLX4 147 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 OR4C45A6NMZ5 311 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 NRASP01111 189 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 MYL12AP19105 171 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 MYF6P23409 242 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 ZFP36P26651 326 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 VHLP40337 213 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 HSPA13P48723 471 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 GBX2P52951 348 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 CSNK2BP67870 215 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 LCN2P80188 198 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 HOXA4Q00056 320 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 MRPL28Q13084 256 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 KCNJ8Q15842 424 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 CEACAM21Q3KPI0 293 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 ESCO2Q56NI9 601 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 FAM76BQ5HYJ3 339 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 DMRTC1Q5HYR2 192 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 CEP78Q5JTW2 689 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 CLVS2Q5SYC1 327 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 OR2G6Q5TZ20 316 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 DCAF12L2Q5VW00 463 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 PLCXD3Q63HM9 321 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 TLNRD1Q9H1K6 362 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 TRIM36Q9NQ86 728 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 FKBP14Q9NWM8 211 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 CLEC2DQ9UHP7 191 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 LRCH1Q9Y2L9 728 aa11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 POLR3KQ9Y2Y1 108 aaPredicted RBP11.57□□□□□ -0.56
HERPUD1-210ENST00000565966 TRAV38-1A0A0B4J264 116 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 KIAA1324LA8MWY0 1029 aaPredicted RBP11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 A8MXK9 166 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 J3QLI3 93 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 LGALS8O00214 317 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 LHBP01229 141 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 ISG15P05161 165 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 RPS2P15880 293 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 ZNF12P17014 697 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 SRP14P37108 136 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 TGM4P49221 684 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 GPM6AP51674 278 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 GTF2A1P52655 376 aaPredicted RBP11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 SEC61A1P61619 476 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 GNG3P63215 75 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 MED21Q13503 144 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 SFRP4Q6FHJ7 346 aaPredicted RBP11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 WDR82Q6UXN9 313 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 TMPRSS11AQ6ZMR5 421 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 DCDC5Q6ZRR9 648 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 KCTD8Q6ZWB6 473 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 AHSA2Q719I0 299 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 GCSAMQ8N6F7 178 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 TEX29Q8N6K0 151 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 BOLLQ8N9W6 283 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 C19orf18Q8NEA5 215 aa11.56□□□□□ -0.56
HERPUD1-210ENST00000565966 DEFB108BQ8NET1 73 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms