RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ZNF684Q5T5D7 378 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 PLCXD3Q63HM9 321 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 ZNF841Q6ZN19 808 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 SLC36A1Q7Z2H8 476 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 KCTD20Q7Z5Y7 419 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 SCCPDHQ8NBX0 429 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 RPL3LQ92901 407 aaKnown RBP16.54■□□□□ 0.24
CMTM3-211ENST00000565922 RNFT2Q96EX2 444 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 MBOAT4Q96T53 435 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 ADI1Q9BV57 179 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 PLEKHA1Q9HB21 404 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 CTSZQ9UBR2 303 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 DNAJB11Q9UBS4 358 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 V9GYS6 101 aa16.54■□□□□ 0.24
CMTM3-211ENST00000565922 KIR2DS1A0A191URI9 304 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 LOC100130705A0A1B0GUX0 176 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 A0A1B0GVI7 797 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 ZNF732B4DXR9 585 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 DLGAP1O14490 977 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 TNFRSF13BO14836 293 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-211ENST00000565922 TMPRSS2O15393 492 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 NRASP01111 189 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 LIPFP07098 398 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 HOXA4Q00056 320 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-211ENST00000565922 KRTAP24-1Q3LI83 254 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 CEP78Q5JTW2 689 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 CLVS2Q5SYC1 327 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 MOB3CQ70IA8 216 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 CATSPERDQ86XM0 798 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 PHC2Q8IXK0 858 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 ZNF671Q8TAW3 534 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 UBE2FQ969M7 185 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 PPP1R14AQ96A00 147 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 DACT3Q96B18 629 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-211ENST00000565922 SLC29A1Q99808 456 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 DNTTIP1Q9H147 329 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 C8orf4Q9NR00 106 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 GNG8Q9UK08 70 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 NUP50Q9UKX7 468 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 COL6A5A8TX70 2615 aa16.53■□□□□ 0.24
CMTM3-211ENST00000565922 FBN1P35555 2871 aaKnown RBP16.52■□□□□ 0.24
CMTM3-211ENST00000565922 IGHV3OR15-7A0A075B7D8 119 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 DAPL1A0PJW8 107 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 P2RY10O00398 339 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 ECDO95905 644 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-211ENST00000565922 UBCP0CG48 685 aaKnown RBP16.52■□□□□ 0.24
CMTM3-211ENST00000565922 CCL1P22362 96 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 ACTA2P62736 377 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 ACTG2P63267 376 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 Q6ZSR3 168 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 ACBD7Q8N6N7 88 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 PNLDC1Q8NA58 520 aaKnown RBP16.52■□□□□ 0.24
CMTM3-211ENST00000565922 ZNF555Q8NEP9 628 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 OR14K1Q8NGZ2 314 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 ZFAND2BQ8WV99 257 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 RORBQ92753 470 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 SMPD3Q9NY59 655 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-211ENST00000565922 SLC22A13Q9Y226 551 aa16.52■□□□□ 0.24
CMTM3-211ENST00000565922 A0A1B0GTI1 187 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 NKX6-3A6NJ46 265 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 GPR37O15354 613 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 SYT7O43581 403 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 GLRA1P23415 457 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 ZNF85Q03923 595 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 TMEM42Q69YG0 159 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 ZNF573Q86YE8 665 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 ENTHD1Q8IYW4 607 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 UPRTQ96BW1 309 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 OR51I2Q9H344 312 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 FAM118AQ9NWS6 357 aa16.51■□□□□ 0.23
CMTM3-211ENST00000565922 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-211ENST00000565922 DVL1O14640 695 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 SLC16A6O15403 523 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 GABRB1P18505 474 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 HILS1P60008 231 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 ISL1P61371 349 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 ZNF91Q05481 1191 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 CDONQ4KMG0 1287 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 TP53I3Q53FA7 332 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 WDR38Q5JTN6 314 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 RBMS3Q6XE24 437 aaKnown RBP16.5■□□□□ 0.23
CMTM3-211ENST00000565922 RHOXF1Q8NHV9 184 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 C10orf35Q96D05 121 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 C19orf24Q9BVV8 132 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 FGF23Q9GZV9 251 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-211ENST00000565922 SMURF1Q9HCE7 757 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 ACOXLQ9NUZ1 547 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 EXOGQ9Y2C4 368 aaKnown RBP16.5■□□□□ 0.23
CMTM3-211ENST00000565922 POLDIP2Q9Y2S7 368 aa16.5■□□□□ 0.23
CMTM3-211ENST00000565922 C22orf46C9J442 243 aa16.49■□□□□ 0.23
CMTM3-211ENST00000565922 J3QRE1 110 aa16.49■□□□□ 0.23
CMTM3-211ENST00000565922 AKR7A2O43488 359 aa16.49■□□□□ 0.23
CMTM3-211ENST00000565922 NDUFB3O43676 98 aa16.49■□□□□ 0.23
CMTM3-211ENST00000565922 GATBO75879 557 aaKnown RBP16.49■□□□□ 0.23
CMTM3-211ENST00000565922 FADS2O95864 444 aaKnown RBP16.49■□□□□ 0.23
CMTM3-211ENST00000565922 DBTP11182 482 aaKnown RBP16.49■□□□□ 0.23
CMTM3-211ENST00000565922 LRRC10Q5BKY1 277 aa16.49■□□□□ 0.23
CMTM3-211ENST00000565922 ATPAF1Q5TC12 328 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-211ENST00000565922 STUMQ69YW2 141 aa16.49■□□□□ 0.23
CMTM3-211ENST00000565922 HAGHLQ6PII5 290 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms