RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 CST2P09228 141 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 FTH1P19P0C7X4 201 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ABOP16442 354 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 CASRP41180 1078 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SELENOPP49908 381 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 NPY4RP50391 375 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 IKZF1Q13422 519 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 UNC119Q13432 240 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 MPPED2Q15777 294 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 MST1LQ2TV78 715 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 MOGAT2Q3SYC2 334 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 NRN1LQ496H8 165 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 CDNFQ49AH0 187 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ABLIM2Q6H8Q1 611 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR10K2Q6IF99 312 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 YRDCQ86U90 279 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 COMMD2Q86X83 199 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF584Q8IVC4 421 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 DMRTC2Q8IXT2 367 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 GPR137CQ8N3F9 429 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 PNLDC1Q8NA58 520 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR11H4Q8NGC9 324 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR4D10Q8NGI6 311 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR52H1Q8NGJ2 320 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR2T35Q8NGX2 323 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR10R2Q8NGX6 335 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR2V1Q8NHB1 315 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 THOC3Q96J01 351 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SFXN2Q96NB2 322 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 PRRT1Q99946 306 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM173AQ9BQD7 235 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SEC22CQ9BRL7 303 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 EDEM2Q9BV94 578 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ABI3Q9P2A4 366 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 MGAT4CQ9UBM8 478 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC25A10Q9UBX3 287 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF391Q9UJN7 358 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 V9GYS6 101 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 KNTC1P50748 2209 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 TMEM235A6NFC5 223 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 F5H5K5 113 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 M0R135 149 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 RLN1P04808 185 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF806P0C7X5 589 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF735P0CB33 412 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC2A1P11166 492 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 PTAFRP25105 342 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 DLSTP36957 453 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 DHODHQ02127 395 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 OC90Q02509 493 aaPredicted RBP6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 SCRN3Q0VDG4 424 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 ARL6IP1Q15041 203 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 CSRP2Q16527 193 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 PNLIPRP3Q17RR3 467 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 RSPO1Q2MKA7 263 aaPredicted RBP6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 ABHD17BQ5VST6 288 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 GLIPR1L1Q6UWM5 242 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 DRAM2Q6UX65 266 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF101Q8IZC7 436 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 UXS1Q8NBZ7 420 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 ACBD4Q8NC06 268 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 OR8S1Q8NH09 359 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF799Q96GE5 643 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM71F1Q96KD3 344 aaPredicted RBP6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 URM1Q9BTM9 101 aaKnown RBP6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 EXO5Q9H790 373 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 PLEK2Q9NYT0 353 aa6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 MRPS28Q9Y2Q9 187 aaKnown RBP6.34□□□□□ -1.39
HERPUD1-209ENST00000564678 MEIS3P1A6NDR6 274 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 CYTIPO60759 359 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 TRAPPC6AO75865 159 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 HCKP08631 526 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 RFPL3SP0C7P2 107 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 VSIG10L2P0DP72 767 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 TMEM11P17152 192 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 GDF1P27539 372 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 CD96P40200 585 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 CBX5P45973 191 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 PER3P56645 1201 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 PCBD1P61457 104 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 SNRPD2P62316 118 aaKnown RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 CD69Q07108 199 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 AIMP2Q13155 320 aaKnown RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 RAB35Q15286 201 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 STK11Q15831 433 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 LGALSLQ3ZCW2 172 aaPredicted RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 RNASE10Q5GAN6 216 aaKnown RBP6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 CLVS2Q5SYC1 327 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 IDO2Q6ZQW0 420 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 AAED1Q7RTV5 226 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 FJX1Q86VR8 437 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 LRRC18Q8N456 261 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 BPIFB2Q8N4F0 458 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 FAM89BQ8N5H3 189 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 CHST4Q8NCG5 386 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 OR2AK2Q8NG84 335 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 OR56B1Q8NGI3 324 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 OR10D3Q8NH80 312 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 ADAMTS17Q8TE56 1095 aa6.34□□□□□ -1.4
HERPUD1-209ENST00000564678 SNAPC3Q92966 411 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms