RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ELOVL6Q9H5J4 265 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 LRRC19Q9H756 370 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 TDRD3Q9H7E2 651 aaKnown RBP2.88□□□□□ -1.95
LINC00560-201ENST00000564593 NTN4Q9HB63 628 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 PARVAQ9NVD7 372 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 COQ4Q9Y3A0 265 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 ARID1AO14497 2285 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 WDR90Q96KV7 1748 aa2.88□□□□□ -1.95
LINC00560-201ENST00000564593 KCNE1BA0A087WTH5 132 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 RSPH10B2B2RC85 870 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 M0R3G1 203 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SLC9A3R1O14745 358 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 RP2O75695 350 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 DCTN3O75935 186 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 KRT7P08729 469 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 RSPH10BP0C881 870 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 IGHV1-8P0DP01 117 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 COILP38432 576 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SLC18A1P54219 525 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 PLTPP55058 493 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 MAGOHP61326 146 aaKnown RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 EIF4EBP2Q13542 120 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 PIGHQ14442 188 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 KCTD16Q68DU8 428 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 C4orf22Q6V702 233 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 NPSR1Q6W5P4 371 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SLC13A5Q86YT5 568 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ZBTB8OSQ8IWT0 167 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 KATNAL2Q8IYT4 538 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 MICU2Q8IYU8 434 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 JAGN1Q8N5M9 183 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 CHST4Q8NCG5 386 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 OR52E2Q8NGJ4 325 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TLCD1Q96CP7 247 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 HAUS1Q96CS2 278 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SLC7A5P2Q9GIP4 190 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 UBE2ZQ9H832 354 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 EDA2RQ9HAV5 297 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 C12orf10Q9HB07 376 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SLC38A10Q9HBR0 1119 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 HMG20AQ9NP66 347 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 MRPL22Q9NWU5 206 aaKnown RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 PDP1Q9P0J1 537 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 RPL26L1Q9UNX3 145 aaKnown RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TFR2Q9UP52 801 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 UBIAD1Q9Y5Z9 338 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ANK1P16157 1881 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF236Q9UL36 1845 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 LRRC37A2A6NM11 1700 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 MYO10Q9HD67 2058 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 CLUHO75153 1309 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 IGLV1-50A0A075B6I6 118 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 EXOC1LA0A1B0GW35 172 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 OR6C74A6NCV1 312 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 K7EMT4 169 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SLC16A4O15374 487 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 CDC40O60508 579 aaKnown RBP eCLIP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF324O75467 553 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 AQP8O94778 261 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 PROSCO94903 275 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TTC4O95801 387 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TNNC2P02585 160 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 CLTAP09496 248 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 CD3GP09693 182 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ATF6P18850 670 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TCN2P20062 427 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 RAB3AP20336 220 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SLC1A2P43004 574 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 GCLMP48507 274 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 HCAR3P49019 387 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 P2RX1P51575 399 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ESRRGP62508 458 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SEMG2Q02383 582 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 CYP24A1Q07973 514 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 DOC2AQ14183 400 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 STK11Q15831 433 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ORMDL2Q53FV1 153 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TPTE2P1Q5T6R2 138 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 DCUN1D2Q6PH85 259 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 MBOAT2Q6ZWT7 520 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ABHD12BQ7Z5M8 362 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 PHF13Q86YI8 300 aaPredicted RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 NPWQ8N729 165 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF321PQ8N8H1 164 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TMEM35BQ8NCS4 154 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TMEM161BQ8NDZ6 487 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 OR10AD1Q8NGE0 317 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 CCDC127Q96BQ5 260 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 SIKE1Q9BRV8 207 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ANKRD60Q9BZ19 345 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 IQCGQ9H095 443 aaKnown RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 FAM96AQ9H5X1 160 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TMEM38AQ9H6F2 299 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 MRPS30Q9NP92 439 aaKnown RBP2.87□□□□□ -1.95
LINC00560-201ENST00000564593 PXMP2Q9NR77 195 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 NRBP2Q9NSY0 501 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 ARL2BPQ9Y2Y0 163 aa2.87□□□□□ -1.95
LINC00560-201ENST00000564593 TRIP11Q15643 1979 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 PLXNA1Q9UIW2 1896 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 TRAV25A0A0B4J276 109 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms