RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ISYNA1Q9NPH2 558 aa14.06□□□□□ -0.16
RNF40-206ENST00000564260 CACNG2Q9Y698 323 aa14.06□□□□□ -0.16
RNF40-206ENST00000564260 PLPP2O43688 288 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 MT-ND2P03891 347 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 CD2P06729 351 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 ACAA1P09110 424 aaPredicted RBP14.05□□□□□ -0.16
RNF40-206ENST00000564260 ZNF20P17024 532 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 MVKQ03426 396 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 IRF3Q14653 427 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 SPRNQ5BIV9 151 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 SERPINA12Q8IW75 414 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 CIARTQ8N365 385 aaPredicted RBP14.05□□□□□ -0.16
RNF40-206ENST00000564260 PARP16Q8N5Y8 322 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 GATAD2BQ8WXI9 593 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 C12orf43Q96C57 262 aaKnown RBP14.05□□□□□ -0.16
RNF40-206ENST00000564260 POLDIP2Q9Y2S7 368 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 ZNF281Q9Y2X9 895 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 F8P00451 2351 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 TANC2Q9HCD6 1990 aa14.05□□□□□ -0.16
RNF40-206ENST00000564260 PPIAL4EA0A075B759 164 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 A6NLC8 198 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 E9PI62 339 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 PPIAL4DF5H284 164 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 LHBP01229 141 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 PPIAL4FP0DN26 164 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 MUC1P15941 1255 aaPredicted RBP14.04□□□□□ -0.16
RNF40-206ENST00000564260 PRKACBP22694 351 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 FUT6P51993 359 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 SPHARQ15513 63 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 MPPED2Q15777 294 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 ODF4Q2M2E3 257 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 C11orf91Q3C1V1 193 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 PRAMEF6Q5VXH4 476 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 MOB3CQ70IA8 216 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 OR5D14Q8NGL3 314 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 OR13C3Q8NGS6 347 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 ZNF671Q8TAW3 534 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 PKIBQ9C010 78 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 OR51I2Q9H344 312 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 PAK1IP1Q9NWT1 392 aaPredicted RBP14.04□□□□□ -0.16
RNF40-206ENST00000564260 DHDHQ9UQ10 334 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 PPIAL4AQ9Y536 164 aa14.04□□□□□ -0.16
RNF40-206ENST00000564260 CHD3Q12873 2000 aaKnown RBP14.03□□□□□ -0.16
RNF40-206ENST00000564260 TRAV38-1A0A0B4J264 116 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 PQLC2LA1A4F0 135 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 ZNF732B4DXR9 585 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 CD5LO43866 347 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 GRPP07492 148 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 PCMT1P22061 227 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 MPZP25189 248 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 THBS2P35442 1172 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 PMELP40967 661 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 GPM6AP51674 278 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 TBCEQ15813 527 aaPredicted RBP14.03□□□□□ -0.16
RNF40-206ENST00000564260 ZNF404Q494X3 552 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 CEP78Q5JTW2 689 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 TEX36Q5VZQ5 186 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 CYB5R2Q6BCY4 276 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 WDR82Q6UXN9 313 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 KCTD8Q6ZWB6 473 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 WDR86Q86TI4 376 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 C11orf53Q8IXP5 236 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 RDH10Q8IZV5 341 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 MS4A15Q8N5U1 240 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 CLDND2Q8NHS1 167 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 ZNF420Q8TAQ5 688 aaPredicted RBP14.03□□□□□ -0.16
RNF40-206ENST00000564260 DVL3Q92997 716 aaPredicted RBP14.03□□□□□ -0.16
RNF40-206ENST00000564260 GAL3ST1Q99999 423 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 PDCD1LG2Q9BQ51 273 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 UFSP2Q9NUQ7 469 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 C1orf123Q9NWV4 160 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 RASL12Q9NYN1 266 aa14.03□□□□□ -0.16
RNF40-206ENST00000564260 hCG_1807616A0A1W2PRN6 198 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 SRRM5B3KS81 715 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 B4DSR2 109 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 J3QT63 122 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 LGALS8O00214 317 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 CDIPTO14735 213 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 SMAD7O15105 426 aaKnown RBP14.02□□□□□ -0.17
RNF40-206ENST00000564260 NOS1APO75052 506 aaPredicted RBP14.02□□□□□ -0.17
RNF40-206ENST00000564260 IGHV2-5P01817 119 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 GTF2A1P52655 376 aaPredicted RBP14.02□□□□□ -0.17
RNF40-206ENST00000564260 LMO4P61968 165 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 ZMYND11Q15326 602 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 DCDC5Q6ZRR9 648 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 LHFPL2Q6ZUX7 228 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 FAM90A1Q86YD7 464 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 GCSAMQ8N6F7 178 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 SCCPDHQ8NBX0 429 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 TSEN15Q8WW01 171 aaKnown RBP14.02□□□□□ -0.17
RNF40-206ENST00000564260 GHSRQ92847 366 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 PGLYRP3Q96LB9 341 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 DNTTIP1Q9H147 329 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 ZNF665Q9H7R5 613 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 ERVK-18Q9QC07 812 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 MIOXQ9UGB7 285 aa14.02□□□□□ -0.17
RNF40-206ENST00000564260 LSM2Q9Y333 95 aaKnown RBP14.02□□□□□ -0.17
RNF40-206ENST00000564260 PPIAL4CA0A0B4J2A2 164 aa14.01□□□□□ -0.17
RNF40-206ENST00000564260 ISPDA4D126 451 aa14.01□□□□□ -0.17
RNF40-206ENST00000564260 OOEPA6NGQ2 149 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms