RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 LHFPL2Q6ZUX7 228 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 ANGPTL5Q86XS5 388 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 SAMD12Q8N8I0 201 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 OR5P3Q8WZ94 311 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 FAM3DQ96BQ1 224 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 GPER1Q99527 375 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 MRI1Q9BV20 369 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 ATP23Q9Y6H3 246 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 IGLV3-9A0A075B6K5 115 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 TMEM272A0A1B0GTI8 110 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 PQLC2LA1A4F0 135 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 DEFB108AA8MXU0 73 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 H0YL77 283 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 TIMM8AO60220 97 aaPredicted RBP8.68□□□□□ -1.02
SMG1-208ENST00000563448 IGHV3-13P01766 116 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 CD3EP07766 207 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 LOXP28300 417 aaPredicted RBP8.68□□□□□ -1.02
SMG1-208ENST00000563448 POU3F4P49335 361 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 RBP2P50120 134 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 ATP1B3P54709 279 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 MTCP1P56278 107 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 ZP1P60852 638 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 BEX5Q5H9J7 111 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 Q6ZR03 302 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 C1QL2Q7Z5L3 287 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 MFSD4AQ8N468 514 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 OR5A2Q8NGI9 324 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 OR5D18Q8NGL1 313 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 CEP19Q96LK0 163 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 C1orf147Q96MC9 270 aaPredicted RBP8.68□□□□□ -1.02
SMG1-208ENST00000563448 SYT3Q9BQG1 590 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 MRPL37Q9BZE1 423 aaKnown RBP8.68□□□□□ -1.02
SMG1-208ENST00000563448 NEK6Q9HC98 313 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 CA10Q9NS85 328 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 DUSP13Q9UII6 198 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 MRPS28Q9Y2Q9 187 aaKnown RBP8.68□□□□□ -1.02
SMG1-208ENST00000563448 ARFGEF3Q5TH69 2177 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 WIPF3A6NGB9 483 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 LDLRAD4O15165 306 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 MLNRO43193 412 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 PLAUP00749 431 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 NAT2P11245 290 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 ARSBP15848 533 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 ETV6P41212 452 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 GPM6AP51674 278 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 SCAND1P57086 179 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 KLF3P57682 345 aaPredicted RBP8.67□□□□□ -1.02
SMG1-208ENST00000563448 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMG1-208ENST00000563448 UBE2NLQ5JXB2 153 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 AWAT2Q6E213 333 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 GLIPR1L1Q6UWM5 242 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
SMG1-208ENST00000563448 NEUROG1Q92886 237 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 MRPL24Q96A35 216 aaKnown RBP8.67□□□□□ -1.02
SMG1-208ENST00000563448 SLC25A38Q96DW6 304 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 RNF170Q96K19 258 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 CMTM3Q96MX0 182 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 HIST1H2AAQ96QV6 131 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 ZNF442Q9H7R0 627 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 TMEM100Q9NV29 134 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 ETV7Q9Y603 341 aa8.67□□□□□ -1.02
SMG1-208ENST00000563448 LOC100289279A0A1B0GTE1 492 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 A0A1B0GWJ7 208 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 FAM25AB3EWG3 89 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 FAM25CB3EWG5 89 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 FAM25GB3EWG6 89 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 ZNF732B4DXR9 585 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 E7EQL1 145 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 SPRY1O43609 319 aaPredicted RBP8.66□□□□□ -1.02
SMG1-208ENST00000563448 BPNT1O95861 308 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 VSIG8P0DPA2 414 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 IGFBP2P18065 325 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 PTGFRP43088 359 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 ALDH3B1P43353 468 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 KIR2DL3P43628 341 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 EVX1P49640 407 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 EFNB2P52799 333 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 QRFPP83859 136 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 OR10K2Q6IF99 312 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 CNIH2Q6PI25 160 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 WDR86Q86TI4 376 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 BIVMQ86UB2 503 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 LRRC28Q86X40 367 aaPredicted RBP8.66□□□□□ -1.02
SMG1-208ENST00000563448 CALHM1Q8IU99 346 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 CMTM4Q8IZR5 234 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 PNLDC1Q8NA58 520 aaKnown RBP8.66□□□□□ -1.02
SMG1-208ENST00000563448 LILRB1Q8NHL6 650 aaPredicted RBP8.66□□□□□ -1.02
SMG1-208ENST00000563448 TNFAIP8L1Q8WVP5 186 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 S100ZQ8WXG8 99 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 GTF3AQ92664 365 aaKnown RBP8.66□□□□□ -1.02
SMG1-208ENST00000563448 PIK3IP1Q96FE7 263 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 DIRAS2Q96HU8 199 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 HS3ST6Q96QI5 342 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 ADAT1Q9BUB4 502 aaKnown RBP8.66□□□□□ -1.02
SMG1-208ENST00000563448 MSL2Q9HCI7 577 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 POU2F3Q9UKI9 436 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 ING4Q9UNL4 249 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 DYSFO75923 2080 aa8.66□□□□□ -1.02
SMG1-208ENST00000563448 TANC2Q9HCD6 1990 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms